KEGG   Medicago truncatula (barrel medic): 11407767
Entry
11407767          CDS       T01716                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03020  RNA polymerase
mtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    11407767
  09124 Replication and repair
   03420 Nucleotide excision repair
    11407767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11407767
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11407767
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11407767
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     11407767
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     11407767
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      11407767
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 11407767
NCBI-ProteinID: XP_003608502
UniProt: B7FHG8
LinkDB
Position
4:46423372..46427212
AA seq 176 aa
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
TGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtgctggagcgaaacatgcaactgcatccacgctactttgggcgt
aaccttcgtgataatcttgtttccaagctaatgaaagatgtcgaaggcacttgcagtgga
cgacatggatttgtggtggcggtgacgggaattgagaacattggcaaaggaataattcgg
gatgggaccggatttgtgacatttccggttaagtaccaatgtgttgtctttagaccattt
aagggagagatcttagaagctgttgttaccatggtgaacaagatgggtttttttgctgaa
gctggaccagttcaaatcttcgtttccaaccatttgattccagatgatatggaattccag
actggagacatgccaaactacactacttcagatggatcggttaagattcagaaagacagt
gaagtgaggctaaagataattgggactcgagtggatgctactgaaattttctgcataggt
accattaaagacgatttcttgggtgtgatcaacgaccctgcaacagtttaa

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