Medicago truncatula (barrel medic): 11407954
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Entry
11407954 CDS
T01716
Name
(RefSeq) proline--tRNA ligase, cytoplasmic
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
11407954
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mtr01007
]
11407954
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11407954
Enzymes [BR:
mtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
11407954
Amino acid related enzymes [BR:
mtr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
11407954
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
11407954
Prokaryotic type
11407954
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
HGTP_anticodon
tRNA-synt_2b
Ubiquitin_4
DUF6376
Motif
Other DBs
NCBI-GeneID:
11407954
NCBI-ProteinID:
XP_024635429
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Position
3:complement(20509506..20516208)
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AA seq
494 aa
AA seq
DB search
MNNKVDIETGLRLINRKDENFEEWYSEVVASAELIEHYDISGLYILRPSAVEIWETLQAF
FNPEIKKMNVESCYFPMFVLECHLKKEKAHYDGFKPEVAWVTKSGQSDLETHLAVRLSSE
AIIYPYYSKWIRGHRDLPLKLNQWCNAVRWVVGDPIPLIRSREFLWQEGHSAFASEEEAD
AEALEILELYRRIYEEYLAVPVIKGTKSVGDTCGGAIFTNAVEAFIPNIGRGIQGAATHC
LGQKFAEKFEINFEDKKVEKTMVWQNSWGFSTRTIGVMVMVHGDDKGLVLPPKVASTQVI
VIPVPYKNVDCEGINDACKAAVKMLREEKIRAELDSRDNYSLERKYSEWEMKGVPLMVEI
GLKGLGNKQVCVVRRDNGAKIDIANADLVEEIKKLLNNVQQNMLDVAKQKRDECIQVIHT
WDEFVEALNQRKMILGPWCDEKVVELDVKQWTENEMGAAKILCSPFDQPELPEGTKCFAS
GKPAKKWSYWGRSY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaggtggatatagagaccggcttaagactcatcaacaggaaggatgaaaat
ttcgaagagtggtattccgaggttgtcgctagtgcggaattgattgagcactatgatatt
tctggtttatatattctgagaccatctgcagtagagatatgggagactttgcaagctttt
tttaatccagagataaagaaaatgaatgttgagagctgctacttccctatgtttgtgcta
gaatgtcatttgaaaaaggagaaggcccattatgacggttttaagccagaggttgcttgg
gtaacaaagtctggacagtctgatttggaaactcatcttgctgttcgtctaagtagtgaa
gctataatatatccctattactctaagtggataaggggacaccgcgacttgcctttgaaa
cttaatcaatggtgcaatgcggttagatgggtggttggagatcccataccattaatcagg
agtcgtgagtttctttggcaagaaggacacagtgcttttgcttctgaggaagaagcagat
gcagaggctctcgagatattggaattatataggcgtatatacgaagagtatttggcagtt
cctgtcataaagggtacgaaaagtgtaggggatacttgtggcggtgcaattttcaccaat
gctgttgaggcttttattccaaacattggtcgtgggatacaaggtgcagctacccattgt
ttgggacaaaagtttgctgagaagtttgagataaactttgaagataagaaggtagagaaa
acaatggtttggcagaactcatgggggttttctactcgaactattggagtgatggtgatg
gttcatggtgatgacaagggattggtgctaccgcctaaagtagcatcaactcaagtcatt
gtgattccagtgccttacaaaaacgttgattgtgaaggaatcaatgacgcttgtaaagca
gccgtgaagatgttgcgtgaagaaaaaattcgtgccgagttagattctagagataactat
tctcttgaaagaaagtattctgaatgggaaatgaaaggtgtccctttaatggttgaaatt
gggctaaagggtttaggaaataagcaggtttgtgttgttcgacgtgataatggtgcaaag
attgacattgctaatgctgatttagttgaagaaataaaaaagttgctcaataatgttcaa
caaaatatgttggatgttgcaaaacagaaacgagatgaatgtattcaagtcatacataca
tgggatgagtttgtagaagctttgaatcaaaggaagatgatcttaggtccttggtgtgac
gagaaggtggtagagttagatgttaaacaatggacagagaatgagatgggagcagcaaag
attctctgtagtccctttgatcagccagaactcccagaaggcaccaagtgctttgcatcg
ggtaagcctgcaaagaagtggtcatactggggccgaagttactag
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