Medicago truncatula (barrel medic): 11408066
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Entry
11408066 CDS
T01716
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 2
KO
K13103
tuftelin-interacting protein 11
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11408066
Spliceosome [BR:
mtr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
11408066
Other components
Complex C specific factors
11408066
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Paralog
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Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
11408066
NCBI-ProteinID:
XP_003623392
UniProt:
G7KTA9
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Position
7:32720547..32722750
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AA seq
617 aa
AA seq
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MNDDALYGVFADSSCGKRRKHDDSSRIQDLTKPVNFVSTGTFMPNEDKFDDNKQEQSLGH
EESVDVGKLENYNGMGMKLMEKMGYKGGGLGKNEQGILNPIEAKLRDKYSGLGFNISNET
TTPLPSLETEKKSEPGEGIQPVVGRKKRRRYKNITSMLDRVQEENALALDSLAQYFRHMH
KRYVEYYKSCKLACVAYSYALPLFIRVFQGLDPLRNPSHGLELVSEWKTLLLGDDSFGIQ
VISSPYTHLVSEVVLPAVRKSGINTWQARDPEPMLRFLDSWKKLLPSSVLATILDTIVMP
KLLSAVDTWEPHRETIPIHTWVHPWLPLLGHKMEREGIYQIVRFKLSNALGTWHPSDGYA
YAILSPWKALFDSDSWQQLIYRYIVPKLKVVLRDDFQVNPRSQNLAQFYWVMNWASAIPI
HLMVDIMQIFFTKWLTVLYHWLCSNPNFGEVRKWYLDWKELIPKELLANESIRYKLHCGL
CMMNQAVECMEVVQPCLKENISYIRASEQRKFETQQKAAASSQQQATASLGGAVNAYGVN
EISVKELIEAYTQDHGLLFKPKSGRMHNGHEIYTFGNVSIIIDSLNQKVYAQNAETWSLE
TLEQLLELQNKFLSKRR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgatgctctctacggggtttttgccgattcgtcttgtggaaaacggagaaaa
cacgacgattcctcgaggatacaagacctcactaaaccggtgaattttgtttcaaccgga
actttcatgcctaatgaggataaatttgatgacaataagcaggagcagagtctaggtcac
gaggaatcagtggatgttgggaaattggagaattacaacggaatgggaatgaagctgatg
gagaaaatgggttataaaggaggtggtcttgggaagaatgagcagggtatattaaatcct
atcgaggcgaaactgagggataaatattctggtcttggatttaacatatctaatgagact
acaactccgttgccctctttggagacggagaagaagagtgaaccgggagaaggcattcag
cctgtagtcggaagaaagaaaagacgtaggtataagaacataacaagtatgctggatcga
gtccaagaagaaaatgcattagcattggattcccttgctcaatactttaggcacatgcac
aaaagatatgtcgagtattataagtcgtgtaaattggcatgcgttgcatactcatatgct
ctgcctttgtttatcagagtgttccaaggattggatcctcttcgaaatccatctcatggt
ttggagttggtatcagagtggaagacattgcttctaggagatgatagttttggtatacaa
gtcatatcatcaccttatacacatttggtttcagaggttgtattgccggctgttagaaaa
tctggtatcaatacctggcaagcacgggatcctgagccaatgctacggtttttggattca
tggaaaaagttgcttccttcttcagttcttgctactatattagacaccatagtcatgccc
aaactattaagtgctgtagatacttgggaaccacaccgcgagacaattcctatccacaca
tgggtgcatccatggctacctctgctagggcacaagatggagagggagggtatctaccag
attgttcgtttcaaattgagtaatgctcttggcacgtggcacccaagtgatggttatgca
tatgctatattgtccccttggaaggctttatttgattctgatagttggcaacaacttata
taccgttatattgtaccaaagctgaaggttgtcttgcgagacgacttccaagtgaacccg
agaagtcagaatcttgctcaattttattgggtgatgaactgggcttcggctattccaatt
catctgatggttgacataatgcagatcttctttaccaagtggcttacggttttatatcat
tggttgtgctcaaatcctaactttggtgaagttagaaaatggtatttggactggaaagaa
cttattccaaaagaacttttggcaaatgagagtattcgatacaagctccattgtggtctt
tgtatgatgaaccaggctgttgaatgtatggaggtggtgcaaccttgtttgaaggagaac
ataagctatattagggcaagtgagcagaggaaatttgagactcagcaaaaagcagcagcc
tcttctcaacaacaggctactgcaagcttgggtggtgctgtcaatgcatatggtgtgaat
gaaatcagcgtgaaagaacttattgaagcctatactcaggatcatggtttactgttcaaa
cctaaatctggtagaatgcacaacggtcatgaaatatatacgtttggcaatgtcagcata
attattgactctctaaaccaaaaggtctatgcccaaaatgcagaaacatggtctttagaa
accctcgaacaattgctagagttgcaaaataaattccttagtaaaagacgttga
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