Medicago truncatula (barrel medic): 11408126
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Entry
11408126 CDS
T01716
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11408126
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
11408126
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
TPR_CcmH_CycH
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
11408126
NCBI-ProteinID:
XP_003596786
UniProt:
G7ITP8
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All DBs
Position
2:complement(42308411..42314797)
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AA seq
992 aa
AA seq
DB search
MIAEKPSWLRHEGMQIFSIDVQPSGLRFATGGGDHKVRIWNMKSLGADMESLDTSERLLA
TLRDHFGSVNCVRWAKHGRFVASGSDDQAILIHERKPGSGTTEFGSGEPPDIENWKVVMT
LRGHSADVVDLNWSPDDSSLASGSLDNTIHIWNMTNGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWSKSLGSTFFRRLGWSPCGHFITTTHGFKKPR
HSAPVLERGEWSATFDFLGHNAPIIVVRFNHFLFKKNSSNTQEGKSEPVGWSNGGSKTGP
KEPQPYNIIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VGAFHFEAKELGQSLNDAELDELKRSRYGDVSGRKINLAESPAQLLLEAASTKQTSAKKA
VSNVQQKKTTAKACVSAGNTTKNSKPQVKDVKKIGGPVGNEPNMVTTTGLISGPVKQKEY
RRPDGRKRIIPEVVGGPVQPESISSAAQQFDFPIVSSEHIKSSDKAISTNDDIRASTLGG
SHVRHSDLKERSGVTARVTISDGLIIEKVSDTSGDGGINVQQMGNSMTSNSLAACSSTLS
IRVFDKKGGVGTSPVLLEARPREHTVNDIAGLANTSMMKETEIVCTRGDQTLWSDRISGK
VTVLAGNVNFWAVGCEDGCLQIYTKCGRRAMPTMMMGSSATFVDCDECWSLMLVTRKGSL
YLWDLLNRTCLLQDSLTSLVASSPNPSTKNEGTIKVISAKLSKSGSPLVVLATRHAFLFD
MNVKCWLRVADDSFPASNLSSSWSLGSIQSGELAALQVDLRKYLARKPGWTRMTDDGVQT
RAHLEAQLASSLALGSANEYRQCLLSYVRFLAREADESRLREVCEGFLGPPTGMAEEPSS
DSNNLAWDPFVLGMRKHKLLREDILPSMASNRKVQRLLNEFMDLLSEFEIVDPNQDQMAL
VLPKSSSPATKLIENSSVAIDKEDGAQAKTLD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaaaaacctagttggcttagacatgagggtatgcaaattttttccattgat
gttcaacctagtggactcagatttgctactggtggtggtgaccacaaggttcgcatatgg
aatatgaaatctcttggtgcggacatggaaagtctcgacacttctgaaaggcttcttgca
accctgcgggatcactttgggtctgtcaattgtgttaggtgggccaagcatggaaggttt
gttgcatcagggtctgatgatcaggcgatattaatacatgagaggaagcctggttcagga
accacggaatttggcagcggagagcctccagatattgaaaactggaaagttgtgatgact
ctgagagggcactctgccgatgtggttgatcttaattggtctcctgatgattcttctttg
gctagtgggagtttggacaacaccatccatatatggaatatgaccaatggaatttgcact
gctgttttaaggggccactctagccttgttaagggggtcgcgtgggatcctattggctct
ttcatagcaagtcaatctgatgataaaactgtgattatttggcgaacaagtgattggagt
cttgctcataggactgatggtcattggtcaaaatcacttggatcaacctttttcaggcgg
cttggatggtctccatgtggtcatttcattaccactactcatggtttcaagaagcctagg
cattctgccccagttcttgaaaggggagaatggtctgcaacatttgatttcttaggacac
aatgctccgataattgtggtgaggttcaaccattttctgttcaaaaagaattcctctaat
actcaggaagggaagtctgagcctgtcgggtggagcaacggtggttccaagactggaccc
aaagagccacagccttacaatattattgccatcggaagtcaggatcggacaataacagtg
tggactactgcaagtccccgtcctttatttgttgctaagcatttttttactcaaagtgtt
gtagatttatcctggagccccgatggatattcactttttgcatgttccttggatggatct
gtgggtgcatttcattttgaggcaaaagaacttggtcagagtttaaatgatgctgagctg
gatgagttgaagagaagtcgttatggcgatgtgagtggtcgtaaaattaatttagctgaa
agcccggcacagttacttctagaagcagcttctaccaaacaaacatcggccaaaaaggcg
gtttctaatgtccaacaaaagaagacaacggcaaaggcttgtgttagtgcagggaacact
acaaagaattccaagcctcaagttaaggacgttaagaagatcggaggtcctgtaggcaat
gagccaaacatggttacaaccactggtctgatttctggtccagttaagcaaaaagagtat
agacgccctgatggccgtaaaagaattattccagaagtagttggagggcctgttcaaccg
gaaagcatttccagtgcagctcagcaatttgattttcctattgtctcttctgaacacata
aagagttctgacaaagctatttctactaatgatgacataagagcaagtacattaggagga
tcacatgttagacattcagatttaaaagaacgttctggggttactgctagggtcacaatt
tctgacggcctgataattgagaaagtttcagatacatccggtgatggaggcatcaatgtt
caacagatgggaaattcaatgacttctaattctttagctgcttgtagttctacactttct
attagagtatttgataagaaaggaggggtcggtacttcacctgttcttttggaagcacgc
ccaagagaacacactgtaaatgacattgcagggctggcaaatacgtcaatgatgaaagaa
acagaaattgtatgcacaaggggggatcaaacactttggtctgataggatatcaggaaaa
gtcactgttttagctggcaacgtgaatttctgggctgttgggtgtgaagatggatgtctg
cagatttatacaaagtgtgggagacgtgcaatgcctacaatgatgatgggatcatctgcc
acatttgtagactgtgatgaatgctggtcattaatgctggtgacaagaaaaggatccctt
tatttatgggatttattgaaccgaacttgtctccttcaagattcattgacttctttagtt
gcttcaagtcctaacccatccactaaaaatgaaggaactattaaagttatttctgcaaag
ctatcaaagtctggttccccgcttgttgtgttggcaacacgccatgctttcctatttgac
atgaatgtcaagtgttggcttagggttgcagatgatagtttccctgcatcaaatttatcc
agctcttggagtttgggttcaattcaaagtggtgagctggctgctttacaggttgatctt
agaaaatatttggctcggaagcctggttggacaagaatgactgatgatggagtgcagaca
cgtgctcatttggaagctcaattggcttcatccttggctttaggatctgccaatgaatat
cgccaatgcctattgtcctatgtacgctttcttgcaagggaagcagatgaatctcgatta
agggaagtctgtgaaggtttccttggacctccaacagggatggctgaggaaccatcttcg
gattcaaataacttagcatgggatccttttgttcttggaatgaggaaacacaagcttctc
agggaagatattcttccatcgatggcgtcgaacagaaaagtccagagattgctaaatgaa
ttcatggacctgttatctgaatttgagatagttgatccaaatcaagaccaaatggctctc
gttttaccaaagtcatcttcaccagcaaccaaactgattgagaacagttcagtagcaatc
gacaaagaggacggtgctcaagcaaagacattggattag
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