Medicago truncatula (barrel medic): 11408174
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Entry
11408174 CDS
T01716
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
11408174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11408174
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
11408174
Prokaryotic type
Archaeal type
TFE
11408174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
zf-C2H2_6
DnaD_N
wHTH-PRTase_assc
A24_N_bact
HypA
Motif
Other DBs
NCBI-GeneID:
11408174
NCBI-ProteinID:
XP_024629315
LinkDB
All DBs
Position
8:complement(35153142..35163038)
Genome browser
AA seq
462 aa
AA seq
DB search
MIEPYNKLVKLAARAFYDDPTSKGDDQPKTGRSDNRGIDVVILDALTRKQWVREEDLAKD
LKLNTKELRRRLQSFAEEKIITRDQRKETAKGAKIYSAAVAATADATKGKMGEEKVKLHT
HSYCCLDYAQIYDVVRYRLHHMKHKLKDELENKNTVQEYICTNCGKRYNALDALRLISFE
DEDFHCEHCNGKLEVESDKLAAQEGEDGDENARRRRREKLKDMLQKMEVQLKPLIDQIGR
VKDLPVPEFGSLQAWEARASAAGRAANGDNAGDSNMGYNGAPLPYSGDTKVVVDFNGTEG
KGDGVKSETDSTSLKVLPPWMITSGMNLTKEQRGEVKQETKTDGTSTSTAAQYTDEKKST
IGHDEKNIQDEYIKAYYAALLKKQHELEEAAKIPQDMNTADDPFSSTSNRQAGMKSKRGE
DDDGTEWEEAPVRGNGGYKVDLNVEADAPAEDNEDDVDWEEG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgattgagccctacaataagcttgttaaactcgctgcgagagctttctatgatgatcct
accagcaaaggagatgatcagcccaaaactggaagaagtgataacagaggaattgacgta
gtcatccttgatgccctcaccagaaaacaatgggttagagaagaagacttggcaaaggac
ctcaaattgaatacaaaggaacttcgtcgaaggctgcagtcctttgcagaagaaaagatt
atcactcgagatcaaaggaaagagacagcaaaaggtgcaaaaatatatagtgccgctgta
gctgctacagctgatgctacgaaaggaaaaatgggagaagaaaaggtcaagctacacaca
cactcttactgttgcctagattatgcacagatatatgatgtggttaggtacagactgcat
cacatgaagcataagctgaaagatgaattggagaacaaaaacaccgttcaagaatatata
tgtacaaattgtggaaaaagatacaatgctttggatgcactgcggttaatatcttttgaa
gatgaagacttccattgtgaacattgtaatggaaaactagaggttgaaagtgataagtta
gctgctcaagaaggtgaagatggagatgagaatgcaagaagacggcggcgcgaaaagtta
aaggacatgcttcaaaagatggaggtacaactcaagcctttaatagaccaaattggtcgg
gtaaaagacttgcctgttccagaatttggcagtcttcaagcatgggaagctcgagctagt
gcagctgggcgtgcagctaatggagataatgctggtgattctaatatgggatataatgga
gcaccactgccatacagtggagataccaaggtggtagttgacttcaatggtactgaaggc
aaaggtgatggtgttaaatctgaaactgacagtacatctttaaaggttttgcctccatgg
atgattacatcaggtatgaatcttacaaaggaacagcgtggagaggtgaagcaggaaaca
aaaacggatgggacttcaacttccacagcagctcaatacacagacgagaaaaagtcaaca
atcgggcatgatgagaaaaatatacaggatgagtatatcaaagcttattatgctgcttta
cttaagaagcaacacgaattggaagaagctgcaaaaattccccaagatatgaacacagca
gatgatccttttagcagtacttccaatcgccaagctggcatgaaatcaaaacgcggggaa
gatgatgatggtactgagtgggaagaggctcctgttagaggaaatggaggttacaaggtg
gatttgaatgttgaagccgatgctccagcagaagacaatgaagatgatgtcgactgggaa
gaaggttga
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