Medicago truncatula (barrel medic): 11408658
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Entry
11408658 CDS
T01716
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome
mtr04144
Endocytosis
mtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11408658
04142 Lysosome
11408658
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
11408658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11408658
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11408658
Membrane trafficking [BR:
mtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
11408658
Exosome [BR:
mtr04147
]
Exosomal proteins
Proteins found in most exosomes
11408658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
EPS8_2nd
Motif
Other DBs
NCBI-GeneID:
11408658
NCBI-ProteinID:
XP_024639483
LinkDB
All DBs
Position
5:complement(31827038..31836206)
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AA seq
1365 aa
AA seq
DB search
MAGDNTPNSMKESSTNVPLEDAPSCLQYFDHLFSSGKLDAFESLKMSRLAVSRNKQKLLG
KWLAEDKLECTEELGDLVKKVDKDLALKIYTKASATPKVIAAFAERREYDKILTYSKQVG
YTLDYIFLLQTILQTDAQGALDFALMMLRMEGGCPVDYNKIADLFLQRNMIREATTFLLE
LLKPDLPEHGHLQTKLLEINLKTFPNVADSILAKGVFSHYDRPRIAKLCEKAGLFIRALQ
HYTELPDIKRIIVKTDAIEHQALVKFFGTLPRKWALECMEQLLLVNLGGNLKIIVQTSKE
YSKQLGVDACIKLFEKFNSDEGLYLFLGAHLRSSKNPDIHFKYIEVAVKTGHITEVERVT
RESCYYDAEKTKNFLMKTNLPNARPLINVCDRFGFVPHLIHYLYSQNMLHYVEEYVQRVN
PQKIPLVVGQLLDDRCPENFIKGLVLSIRSPFPVEPLVEEFVKRNRLRLLTQILEDLVWE
GSRDVHVHNALGRIIIDSNSNPVHFLTTNLYYDSRVIGKYCEQRDPTLAVVAYTRGKCDY
ELVNVTNKNSLFKLQARYVMERMDGGLWKEVLNPGNVFRRQLIDQVVSTALPKCKSPDQV
SAAVKAFMTANLTHEVIDLLDKIVLHNSAFSANFTLKSLLILAAIKADPLRVMGYINRLD
NFDGSAVGKAAVEARLYEEAFAVFKKFNLNVKAVNVLLDNLKTIDRAMEFAFCVEEDSVW
SQVAKAKLRKGLVSDAIELFIRADDATQFLEVIKAAEVANVYHDLVKYLLMVRQKTKEPK
VDSELIYAYAKIGRLGEIEEFILMPNVSNLPNVGDRLYAEALYEAAKIIFAFIPDWAKLA
VTLVKLQQFQDAVDAAKKANSLKTWKDVCFSCIDAGESSLAQICGLNVIVQADDLEEVCK
YYQNRRRFNELISLMEKGIELECAHESIFTELGVLYARYRPEMLMEHIKLFSTNLNSLKL
FQACDEHQLWKELTYLYVQFEEFNNAAITVMNHSREAWDHMQFKHIIVNVGRVELYYKAV
HFYLQEHPDIINDLLNVLARHVEHARIVEIAQKAGHIRLIKPYMVEVQSSNVFSINEALH
EIYVDEVDYDRLRKSIDLYDNFNQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSICML
KKDKLYKDCMETCYQSGDQKLSEDLLVYFSEQGKKECFASCLSTCYDLIRPDVALELAWK
NNMMDFSFPYLLQSIREYTSKVDELIKDKVEAENEKKVKEKERKNIIAQQIPPASRISVQ
IRSKFRFLFQSIEHFVSNIFHQERSDCSVLHYSIVLHQGCNNILHRGRSDCSVQHIILQR
EYKVAHRFLHQQMDVRQMNESEPCSSSIAGSMWRKDIVTVGLVDG
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgataacactcctaactccatgaaagaatcctcaacgaacgtacctttggaa
gatgcaccatcatgcttacaatactttgaccatctgttttctagtggaaaactggatgct
tttgagtcattgaaaatgtcacggctagccgtaagtcgaaacaaacagaaacttttagga
aaatggctagcagaggataaacttgaatgcactgaagagcttggtgaccttgtgaagaaa
gtggataaagacctggcattgaaaatatatactaaagcaagtgccacaccaaaggttatt
gcagcttttgctgagaggagggaatatgataagattttgacatactcaaagcaggttgga
tacactcttgattacatattccttctgcaaacaatattgcaaacagatgcccagggtgct
ctagattttgctctgatgatgttgcgaatggaggggggttgccctgttgactacaacaaa
atagccgatctgtttcttcagaggaatatgatccgtgaggcaactacctttttgttggaa
ctgctgaagccagacctacctgaacatggacatcttcaaacaaagctgctggaaatcaat
cttaagacctttccaaatgttgctgattctatattggcaaaaggcgtgtttagtcattat
gatcgtccacgtattgctaaactttgtgaaaaggccggccttttcatccgggctcttcag
cattatactgagttgcctgacatcaaacgcatcattgtgaaaactgatgccattgaacat
caggctcttgttaagttttttggaacccttcctcgaaaatgggcactggagtgtatggaa
caacttttacttgtcaaccttgggggaaatcttaaaataattgtgcagacttccaaggaa
tattcgaaacagctgggtgttgatgcatgcatcaaactctttgagaaattcaattctgat
gaaggattataccttttcttgggtgcacatttgagatctagtaagaatcctgacattcac
ttcaagtacattgaagtagctgttaaaacgggacatattacggaggtagagcgtgtaacc
cgggaatcatgctattatgatgctgagaagacaaagaactttctaatgaagaccaacctt
ccaaatgcacggccactgattaatgtgtgtgatcgttttggttttgttcctcatctcata
cattatctctatagtcaaaacatgcttcattatgttgaagaatatgttcaaagggtcaat
cctcaaaagattcctctagttgtagggcagttgttagatgatcgatgccctgaaaatttc
attaaaggtcttgtactttcgattcgttctcctttcccagttgagcctttagttgaagaa
tttgtaaagaggaatcgtcttcgtttgcttactcagatcttggaggatcttgtgtgggag
gggagccgagatgtacatgtgcataatgctcttgggagaatcatcattgacagcaatagc
aatccagtacattttctcacaaccaacctatattatgattctcgtgttattggtaaatat
tgtgagcaaagggacccaacacttgccgttgttgcttacacaagggggaaatgtgattat
gagcttgttaatgtgaccaataaaaattccttgttcaaactccaagccagatatgttatg
gaacggatggatggtggcctctggaaagaggttctaaatcctgggaacgtgtttagaaga
cagttgattgatcaagtggtgtctactgctttgcctaaatgcaagagtcctgaccaagtt
tcagctgcagtgaaagcttttatgactgccaatcttacccatgaagtgattgaccttctc
gacaagattgtgctacataattctgcttttagtgcaaacttcactctaaaaagcttactg
atccttgctgcaataaaagcagatcctttaagagtcatgggttacataaataggctggac
aactttgatggctctgctgtcgggaaggcggcagtggaagcacgcttatatgaagaagct
tttgccgttttcaagaaatttaatctgaatgttaaggctgttaatgttctgctagataac
cttaagaccattgatcgagctatggagtttgcattctgcgttgaagaagattctgtatgg
agccaggtggctaaggcgaaactaagaaaaggcttagtaagtgatgcaattgagttgttc
atccgtgcagatgatgccactcagtttttagaggttataaaggctgctgaagttgcaaat
gtataccatgacctagtaaagtaccttctcatggttaggcagaagaccaaagagcccaag
gtggacagtgagctcatttatgcgtatgcaaagattggtcggcttggagaaattgaagag
tttattttgatgccaaatgtttctaatttgccaaatgttggagaccgcttgtatgctgag
gcgctttatgaggctgcaaaaattatatttgcttttatccctgactgggctaagttagca
gtgacattggtgaagcttcaacaattccaagatgctgttgatgctgctaagaaagcaaac
agtttgaaaacatggaaggatgtttgtttttcctgcattgatgctggggaatcctcctta
gctcagatttgtggtctcaatgttattgttcaggcggacgatctggaagaagtttgcaag
tattatcagaacagaagacgcttcaatgaactcatctctctaatggagaaagggatagaa
ctggagtgtgctcatgagagtatctttactgagttgggagttctttacgcaagatatcgt
cctgagatgttaatggagcacattaagttgttctcaaccaacctcaacagtctcaagctt
tttcaggcgtgtgatgaacatcaactctggaaagaactcacatacctatatgtgcaattt
gaagagtttaataatgctgcaatcactgtaatgaatcactctcgagaagcatgggaccac
atgcaattcaaacatattatagtaaatgttggtcgtgtagaactatattataaggctgtt
catttctacttgcaagaacatcctgatattataaatgatcttcttaatgtgcttgcccgt
catgtggaacatgcccgtattgtagaaatagcgcagaaggcaggccatatccgattgata
aagccgtacatggttgaagttcaaagcagcaatgtgttttctattaatgaagctttgcat
gaaatttatgttgacgaggtggactacgatagacttcgtaaatcgatagatctgtatgac
aacttcaatcagataggtcttgcacagaagattgagaagcacgagctccttgagatgaga
cgtgttgctgcttatatttacaagaaagctggaagatggaaacagtccatttgtatgtta
aagaaagacaaactttacaaggactgcatggaaacttgctatcaatctggtgaccagaaa
ctctcagaggatttgcttgtttattttagtgagcaggggaagaaagagtgttttgcatcg
tgcctctctacttgttatgatctaatacggccagatgttgcattagagctagcttggaag
aacaatatgatggatttttccttcccttatctcttacagtctattcgggaatatacgagc
aaggtagatgagcttataaaagacaaagttgaagcagaaaatgagaagaaagttaaagaa
aaggagagaaagaacattattgcccaacagattccaccggcatcaagaatttctgttcaa
attcgaagcaagttcagatttttatttcagagcatcgagcatttcgtatcgaatattttt
caccaggagcgttcagattgttctgttctgcactacagcattgttcttcaccagggctgc
aacaatattcttcaccgtgggcgttcagattgttctgttcagcacatcatcctccagagg
gaatacaaggtcgcacaccgattccttcatcaacagatggatgtgcgtcaaatgaatgaa
tcagaaccttgcagctcatcaattgcaggaagtatgtggaggaaggatatagtgactgtt
ggcttagttgatggataa
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