KEGG   Medicago truncatula (barrel medic): 11408658
Entry
11408658          CDS       T01716                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04142  Lysosome
mtr04144  Endocytosis
mtr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    11408658
   04142 Lysosome
    11408658
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    11408658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11408658
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11408658
Membrane trafficking [BR:mtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    11408658
Exosome [BR:mtr04147]
 Exosomal proteins
  Proteins found in most exosomes
   11408658
SSDB
Motif
Pfam: Clathrin EPS8_2nd
Other DBs
NCBI-GeneID: 11408658
NCBI-ProteinID: XP_024639483
LinkDB
Position
5:complement(31827038..31836206)
AA seq 1365 aa
MAGDNTPNSMKESSTNVPLEDAPSCLQYFDHLFSSGKLDAFESLKMSRLAVSRNKQKLLG
KWLAEDKLECTEELGDLVKKVDKDLALKIYTKASATPKVIAAFAERREYDKILTYSKQVG
YTLDYIFLLQTILQTDAQGALDFALMMLRMEGGCPVDYNKIADLFLQRNMIREATTFLLE
LLKPDLPEHGHLQTKLLEINLKTFPNVADSILAKGVFSHYDRPRIAKLCEKAGLFIRALQ
HYTELPDIKRIIVKTDAIEHQALVKFFGTLPRKWALECMEQLLLVNLGGNLKIIVQTSKE
YSKQLGVDACIKLFEKFNSDEGLYLFLGAHLRSSKNPDIHFKYIEVAVKTGHITEVERVT
RESCYYDAEKTKNFLMKTNLPNARPLINVCDRFGFVPHLIHYLYSQNMLHYVEEYVQRVN
PQKIPLVVGQLLDDRCPENFIKGLVLSIRSPFPVEPLVEEFVKRNRLRLLTQILEDLVWE
GSRDVHVHNALGRIIIDSNSNPVHFLTTNLYYDSRVIGKYCEQRDPTLAVVAYTRGKCDY
ELVNVTNKNSLFKLQARYVMERMDGGLWKEVLNPGNVFRRQLIDQVVSTALPKCKSPDQV
SAAVKAFMTANLTHEVIDLLDKIVLHNSAFSANFTLKSLLILAAIKADPLRVMGYINRLD
NFDGSAVGKAAVEARLYEEAFAVFKKFNLNVKAVNVLLDNLKTIDRAMEFAFCVEEDSVW
SQVAKAKLRKGLVSDAIELFIRADDATQFLEVIKAAEVANVYHDLVKYLLMVRQKTKEPK
VDSELIYAYAKIGRLGEIEEFILMPNVSNLPNVGDRLYAEALYEAAKIIFAFIPDWAKLA
VTLVKLQQFQDAVDAAKKANSLKTWKDVCFSCIDAGESSLAQICGLNVIVQADDLEEVCK
YYQNRRRFNELISLMEKGIELECAHESIFTELGVLYARYRPEMLMEHIKLFSTNLNSLKL
FQACDEHQLWKELTYLYVQFEEFNNAAITVMNHSREAWDHMQFKHIIVNVGRVELYYKAV
HFYLQEHPDIINDLLNVLARHVEHARIVEIAQKAGHIRLIKPYMVEVQSSNVFSINEALH
EIYVDEVDYDRLRKSIDLYDNFNQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSICML
KKDKLYKDCMETCYQSGDQKLSEDLLVYFSEQGKKECFASCLSTCYDLIRPDVALELAWK
NNMMDFSFPYLLQSIREYTSKVDELIKDKVEAENEKKVKEKERKNIIAQQIPPASRISVQ
IRSKFRFLFQSIEHFVSNIFHQERSDCSVLHYSIVLHQGCNNILHRGRSDCSVQHIILQR
EYKVAHRFLHQQMDVRQMNESEPCSSSIAGSMWRKDIVTVGLVDG
NT seq 4098 nt   +upstreamnt  +downstreamnt
atggcgggtgataacactcctaactccatgaaagaatcctcaacgaacgtacctttggaa
gatgcaccatcatgcttacaatactttgaccatctgttttctagtggaaaactggatgct
tttgagtcattgaaaatgtcacggctagccgtaagtcgaaacaaacagaaacttttagga
aaatggctagcagaggataaacttgaatgcactgaagagcttggtgaccttgtgaagaaa
gtggataaagacctggcattgaaaatatatactaaagcaagtgccacaccaaaggttatt
gcagcttttgctgagaggagggaatatgataagattttgacatactcaaagcaggttgga
tacactcttgattacatattccttctgcaaacaatattgcaaacagatgcccagggtgct
ctagattttgctctgatgatgttgcgaatggaggggggttgccctgttgactacaacaaa
atagccgatctgtttcttcagaggaatatgatccgtgaggcaactacctttttgttggaa
ctgctgaagccagacctacctgaacatggacatcttcaaacaaagctgctggaaatcaat
cttaagacctttccaaatgttgctgattctatattggcaaaaggcgtgtttagtcattat
gatcgtccacgtattgctaaactttgtgaaaaggccggccttttcatccgggctcttcag
cattatactgagttgcctgacatcaaacgcatcattgtgaaaactgatgccattgaacat
caggctcttgttaagttttttggaacccttcctcgaaaatgggcactggagtgtatggaa
caacttttacttgtcaaccttgggggaaatcttaaaataattgtgcagacttccaaggaa
tattcgaaacagctgggtgttgatgcatgcatcaaactctttgagaaattcaattctgat
gaaggattataccttttcttgggtgcacatttgagatctagtaagaatcctgacattcac
ttcaagtacattgaagtagctgttaaaacgggacatattacggaggtagagcgtgtaacc
cgggaatcatgctattatgatgctgagaagacaaagaactttctaatgaagaccaacctt
ccaaatgcacggccactgattaatgtgtgtgatcgttttggttttgttcctcatctcata
cattatctctatagtcaaaacatgcttcattatgttgaagaatatgttcaaagggtcaat
cctcaaaagattcctctagttgtagggcagttgttagatgatcgatgccctgaaaatttc
attaaaggtcttgtactttcgattcgttctcctttcccagttgagcctttagttgaagaa
tttgtaaagaggaatcgtcttcgtttgcttactcagatcttggaggatcttgtgtgggag
gggagccgagatgtacatgtgcataatgctcttgggagaatcatcattgacagcaatagc
aatccagtacattttctcacaaccaacctatattatgattctcgtgttattggtaaatat
tgtgagcaaagggacccaacacttgccgttgttgcttacacaagggggaaatgtgattat
gagcttgttaatgtgaccaataaaaattccttgttcaaactccaagccagatatgttatg
gaacggatggatggtggcctctggaaagaggttctaaatcctgggaacgtgtttagaaga
cagttgattgatcaagtggtgtctactgctttgcctaaatgcaagagtcctgaccaagtt
tcagctgcagtgaaagcttttatgactgccaatcttacccatgaagtgattgaccttctc
gacaagattgtgctacataattctgcttttagtgcaaacttcactctaaaaagcttactg
atccttgctgcaataaaagcagatcctttaagagtcatgggttacataaataggctggac
aactttgatggctctgctgtcgggaaggcggcagtggaagcacgcttatatgaagaagct
tttgccgttttcaagaaatttaatctgaatgttaaggctgttaatgttctgctagataac
cttaagaccattgatcgagctatggagtttgcattctgcgttgaagaagattctgtatgg
agccaggtggctaaggcgaaactaagaaaaggcttagtaagtgatgcaattgagttgttc
atccgtgcagatgatgccactcagtttttagaggttataaaggctgctgaagttgcaaat
gtataccatgacctagtaaagtaccttctcatggttaggcagaagaccaaagagcccaag
gtggacagtgagctcatttatgcgtatgcaaagattggtcggcttggagaaattgaagag
tttattttgatgccaaatgtttctaatttgccaaatgttggagaccgcttgtatgctgag
gcgctttatgaggctgcaaaaattatatttgcttttatccctgactgggctaagttagca
gtgacattggtgaagcttcaacaattccaagatgctgttgatgctgctaagaaagcaaac
agtttgaaaacatggaaggatgtttgtttttcctgcattgatgctggggaatcctcctta
gctcagatttgtggtctcaatgttattgttcaggcggacgatctggaagaagtttgcaag
tattatcagaacagaagacgcttcaatgaactcatctctctaatggagaaagggatagaa
ctggagtgtgctcatgagagtatctttactgagttgggagttctttacgcaagatatcgt
cctgagatgttaatggagcacattaagttgttctcaaccaacctcaacagtctcaagctt
tttcaggcgtgtgatgaacatcaactctggaaagaactcacatacctatatgtgcaattt
gaagagtttaataatgctgcaatcactgtaatgaatcactctcgagaagcatgggaccac
atgcaattcaaacatattatagtaaatgttggtcgtgtagaactatattataaggctgtt
catttctacttgcaagaacatcctgatattataaatgatcttcttaatgtgcttgcccgt
catgtggaacatgcccgtattgtagaaatagcgcagaaggcaggccatatccgattgata
aagccgtacatggttgaagttcaaagcagcaatgtgttttctattaatgaagctttgcat
gaaatttatgttgacgaggtggactacgatagacttcgtaaatcgatagatctgtatgac
aacttcaatcagataggtcttgcacagaagattgagaagcacgagctccttgagatgaga
cgtgttgctgcttatatttacaagaaagctggaagatggaaacagtccatttgtatgtta
aagaaagacaaactttacaaggactgcatggaaacttgctatcaatctggtgaccagaaa
ctctcagaggatttgcttgtttattttagtgagcaggggaagaaagagtgttttgcatcg
tgcctctctacttgttatgatctaatacggccagatgttgcattagagctagcttggaag
aacaatatgatggatttttccttcccttatctcttacagtctattcgggaatatacgagc
aaggtagatgagcttataaaagacaaagttgaagcagaaaatgagaagaaagttaaagaa
aaggagagaaagaacattattgcccaacagattccaccggcatcaagaatttctgttcaa
attcgaagcaagttcagatttttatttcagagcatcgagcatttcgtatcgaatattttt
caccaggagcgttcagattgttctgttctgcactacagcattgttcttcaccagggctgc
aacaatattcttcaccgtgggcgttcagattgttctgttcagcacatcatcctccagagg
gaatacaaggtcgcacaccgattccttcatcaacagatggatgtgcgtcaaatgaatgaa
tcagaaccttgcagctcatcaattgcaggaagtatgtggaggaaggatatagtgactgtt
ggcttagttgatggataa

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