Medicago truncatula (barrel medic): 11408829
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Entry
11408829 CDS
T01716
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11408829
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11408829
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
11408829
NCBI-ProteinID:
XP_003618787
UniProt:
G7KN73
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Position
6:complement(7766525..7770033)
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AA seq
404 aa
AA seq
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MTFLSYFLILFALLIPNFVSSSSVQDPELVVQDVQRSINVSRSRRNLGYLSCGTGNPIDD
CWRCDPNWENNRQRLADCAIGFGKDAIGGKNGKIYIVTDSGDDDAVNPKPGTLRYGAIQD
EPLWIIFKRDMVIQLKQELLVNSYKTIDGRGASVHIANGGCITIHYVNNVIIHGIHVHDC
VPTGNTNIRDSPEHSGFWTVSDGDGISVFNSQHIWIDHCSLSNCRDGLIDVIHGSNAITI
SNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFLAPDNRFSKEVTKHEDASESEYNSWNWRSEGDLFLNGAF
FRQTGAESSSIYARASSLSARPASLVGSITTTSGVLTCKKGNRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacttttctttcatactttctcattctttttgctcttttaatcccaaattttgtttca
tcctcttcagttcaagaccctgaacttgttgtacaagatgtacaaaggagcatcaatgtc
tctaggtctaggagaaacttgggctatttatcatgtggaactggcaacccaattgatgat
tgttggagatgtgacccaaattgggagaacaaccgacaaagactagctgattgtgcaatt
ggatttggaaaagatgcaattggtggtaaaaatggtaaaatctacattgtaactgattca
ggtgatgatgatgcagtaaaccctaaaccaggaaccctaaggtatggtgcaattcaagat
gaaccattatggatcatattcaaaagagatatggtaattcagttaaaacaagagcttttg
gtaaattcatacaagacaattgatggaagaggtgctagtgttcacattgcaaatggtgga
tgtattacaatacattatgttaataatgttataatacatggtattcatgttcatgattgt
gttccaacagggaatacaaatataagggattcaccagaacatagtggtttttggaccgtt
tctgatggtgatggaatttcagtgtttaattcacaacatatttggattgatcattgttct
ttgtctaattgtcgtgatggtcttattgatgttatacatggatctaatgctattactatt
tcaaataactatatgactcatcatgacaaagttatgcttttgggacatagtgattcttat
acacaagacaaggacatgcaagttactattgcttttaatcattttggtgaagggcttgtc
caaagaatgccaagatgtagacatggctattttcatgtggtgaacaatgattacacacat
tgggaaatgtatgcaattggagggagtgctaaccctacaatcaatagccaagggaacaga
tttcttgcaccagataatagatttagcaaggaagtaacaaagcatgaagatgcatcagaa
agtgaatataatagttggaattggagatcagagggtgatttgttcttgaatggagcattc
tttagacaaactggtgctgaatcttcttcaatctatgctagggcttcaagtcttagtgca
agaccagcctctcttgttggttccatcactactacttctggtgtgctcacttgcaagaag
ggaaaccgttgctaa
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