KEGG   Medicago truncatula (barrel medic): 11408938
Entry
11408938          CDS       T01716                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    11408938
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11408938
Enzymes [BR:mtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     11408938
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    11408938
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    11408938
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 DEAD zf-RING_5 ResIII Prok-RING_4 zf-RING_UBOX zf-ANAPC11 zf-rbx1 RING_XB3-XBAT31 HDA2-3 AAA_34 Rad50_zn_hook zf-Nse
Other DBs
NCBI-GeneID: 11408938
NCBI-ProteinID: XP_003624935
UniProt: G7L5V8
LinkDB
Position
7:complement(41767845..41772380)
AA seq 822 aa
MEDSQEPFSQSQSETYLAGFVMANIVGIKHYSGTITGREILGLIREPLNPYDSNAIKVLN
TQTLQVGYIERAVASALAPLLDAHIIHVEAIVQPRSNNNKFRIPCQIHIFAHQSSFDAVH
DAFNGSNVHFISYSDPSFTLSHSAAVKETRADTFNSDSVTTGNNNSKNLDQIFKLVRENL
ASKTLVSEPLNPPSSIIKSELLQHQKEALGWLYHRESTQDLPPFWEEKVGNFVNVLTNYQ
TNARPEPLRGGIFADGMGLGKTLTLLSLISYDKMKMKSGKKRGRSSVERVESETNGTLIV
CPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEELRKYDIVLTTYATLGAELRCSD
TPVKKLGWRRIVLDEAHTIKNVNAGQSQAVIALNAKRRWAVTGTPIQNGSYDLFSLMAFL
HFEPFSIKSYWQSLVQRPLNQGKQTGMSRLQVLMSAISLRRTKDTALGGLPPKIVETCYV
ELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTVLSMILRLRQICADFSMVPLDFKS
CLFSSTDIEDVSKNPELLQTLIRMLQDGEDFDCPICLSPPTDIVITCCAHIFCRECILKT
LQRSNSSCPLCRRSLSETELFSAPPESFKTDDTDVTTELCTAEVRSSTKVSTLIKLLTES
RDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMNAKQRAQVIEQFQLSEVDEP
MILLASLRASSTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNS
IEEKILMLQEKKKKTITSRGSGRRSRDIAGMGIEDLHFVLGE
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggaagactcacaagaacccttctctcaatcccaatccgaaacctacctcgccggtttc
gtaatggccaacatcgtcggcattaaacactactccggcaccatcaccggtcgcgaaatc
ctcggcttaatccgcgaacctttaaacccatacgattccaacgccatcaaagtcctcaac
actcaaacgctccaagtcggttacatcgaacgcgccgttgcctccgctctcgctcctctc
ctcgacgctcacatcatccacgtcgaagccatcgttcaaccccgctctaacaataacaaa
ttccgtatcccttgtcagattcatatcttcgctcatcaatcttcttttgatgctgttcat
gacgcttttaacggttccaatgttcatttcatttcgtatagcgatccttcgtttactctt
tctcattccgccgccgttaaagaaacacgcgccgacaccttcaactctgattctgtaacc
accggtaataataatagtaaaaacctagatcaaattttcaaactcgttcgagaaaaccta
gcttccaaaaccctagtttctgaaccgttaaaccctccttctagcattatcaaatcagag
cttctgcagcaccaaaaagaagcactgggatggctttatcatcgcgaaagtacccaagat
ttaccgccgttttgggaggagaaagtggggaatttcgtcaatgtgttgacgaattatcaa
actaatgcgcgaccggagcctcttcggggagggatattcgcagatgggatgggattaggg
aagactttaactttgttatctttgattagttatgataaaatgaaaatgaaaagtgggaag
aaaagaggtaggagtagtgtagagagggtggagagtgagacaaatggtacattgattgtg
tgtcctccttctgtgatttcgacgtggataactcagttggaggaacatactaaccgcggc
acgttgaaggtttatatgtactatggtgataggaggactcaagatgctgaggagttgagg
aaatatgatattgtgttgactacttatgctacattgggagccgagttgcggtgttcagat
actcctgtgaagaaattggggtggaggaggattgttttggatgaggcgcatacaattaag
aatgttaatgcgggacagagtcaggctgttattgctttgaatgctaagaggagatgggct
gttacggggacgcctattcagaatggttcttatgatttgttttctcttatggcttttttg
cattttgagccgttttctattaagagttattggcaaagcttggttcagcgacctcttaat
caaggaaaacagactgggatgagtcgattgcaggttttgatgtcggcgatatcattgcga
agaaccaaagacactgcattgggggggcttccacctaagattgttgagacttgttatgtt
gaactttcatttgaagaacgtaaactgtatgatgaggttaaagaggaaataaagtcgctt
atgatgcatcataacagcaatgacagactagtatctagttattccactgtactaagtatg
attctaagacttcgtcagatctgtgctgatttttcgatggttcctttggatttcaagtcc
tgtctattttcttcaactgatattgaagatgtttccaagaaccctgaattgctgcaaaca
ttaattaggatgctacaggatggtgaagattttgattgtccaatttgtttatctccccca
acagatattgtaattacatgttgtgctcatattttctgccgagaatgtattctgaaaact
cttcaacgcagcaattccagctgtccactttgtcggcgctccctctcagaaacggagtta
ttctcagctccccctgaatctttcaagaccgatgatactgatgttactactgagctgtgc
acagctgaagtaaggtcatctaccaaagtctctactttgataaagcttcttacagaatcg
agggatcaaaatccagctacaaaatcagttgtattttcacaattccgtaagatgctgctg
ttgttagaagaacctttaaaagcagctggctttaaaacattgcgtcttgatgggacaatg
aatgccaaacaaagggctcaagttattgaacaatttcaactctcggaagttgatgagcca
atgattctgcttgcaagtctcagagcttcaagtacaggaataaatcttactgctgcctcc
agagtgtacttaatggagccatggtggaaccctgctgttgaagaacaagcaatggatcgt
gtccaccgcattggacagaaagaagaagtgaaaattgttagactgattgcaaaaaacagc
attgaagagaaaatactaatgttgcaagagaagaagaagaaaacgataacaagccgagga
tctggaagaagatcaagggatatcgctggtatgggcatagaggatctccattttgtttta
ggagaatag

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