KEGG   Medicago truncatula (barrel medic): 11408942
Entry
11408942          CDS       T01716                                 
Name
(RefSeq) formin-like protein 5
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03013  Nucleocytoplasmic transport
mtr03015  mRNA surveillance pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11408942
  09122 Translation
   03013 Nucleocytoplasmic transport
    11408942
   03015 mRNA surveillance pathway
    11408942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11408942
   03041 Spliceosome [BR:mtr03041]
    11408942
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     11408942
Spliceosome [BR:mtr03041]
 Complex C
  Other components
   EJC/TREX
    11408942
SSDB
Motif
Pfam: RSB_motif SAP LbH_EIF2B
Other DBs
NCBI-GeneID: 11408942
NCBI-ProteinID: XP_003602011
UniProt: G7J4D9
LinkDB
Position
3:43250869..43254795
AA seq 720 aa
MSSNSKYPILDDKPIDKWKVTELKEELKRRKLVTKGLKEDLINRLDEALREEREAAEAAR
KKEQEAAEASPEQEAAEGSKKDEANGLDTQVDELKDSKTINVDAEVFGTIQASEQGNSGV
VEPFETDNVAKVPEVLDNDGIKNVDEDGVTDPVDANNSVSAMDVEGEHVESANAGEEAVA
HPSNVETTVTITETVVTKTVSTEVVVDGQDSYSSEKNNEDSAIKLGNEESKVQLDSEDSK
PQLESDTKPPCDNLMPNSSAPENQVSEVNPSIIGTQVKSDSFSTDSVSINQKNELKDTII
ANNVKLEQDNVRQEMVEEPSSRNDVPVYDESHSVDVGGLHEKKSSVEANNNNVTSPELNK
TNSSDDVGYSEKLNLDRSSGDDSMEEDLPEIRQYDSKFNDELSDKVENNEVLKGKEQSKT
IVVGDGVSARNSDTHQDMNISTVSLTEKRKYPEQTLVGNNEPAKRQRRWNTEAVKGADLQ
STTPRSATTPKDGQITLKRNLSRSNSSATDDTPKERIVPPSRRAPTNSLRIDQFLRPFTL
KAVQELLGKTGSVSSFWMDQIKTHCYVTYSSTEEAIETRNAVYNLQWPTNGGRLLIAEFV
DPEEVKMKLEAPPTPTAAVNSAPIVPPAPPSSQPEPSPRQHREQHLPVTLPPPPPLVRPP
PVAREHLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLAAQGKSTRQ
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgtcatcaaactcaaaatacccgattctggacgataagcctattgataagtggaaggtt
acagagctgaaagaggaactgaaaagaaggaagttggttaccaaaggtttgaaggaagat
ttaattaatcgtttggacgaagcccttcgcgaggaaagggaggctgctgaggctgcccgc
aaaaaggaacaggaggctgccgaggcttcccccgaacaggaggcagccgagggttcgaag
aaggacgaggctaacggtttggacactcaagttgatgagttaaaagattccaagactatt
aatgtggacgctgaagtgtttggtacaattcaagcttctgaacaggggaatagtggtgta
gttgaaccatttgaaactgataatgtagcgaaggttccagaggttttggataatgacggt
attaagaatgttgacgaggatggtgtcactgacccagttgacgctaataatagtgtgtca
gcaatggatgtagaaggtgaacatgtggaatctgctaacgcgggagaggaggctgttgcc
catccttctaatgtggagaccactgttacgataactgagactgtcgtcaccaagactgta
tcaacagaagtagtagtcgatggtcaggattcttatagttctgagaagaataatgaggat
tcggcaatcaagctagggaatgaggaatcaaaggtgcagctggacagtgaggactcaaag
ccccaactggagtctgacacaaagcctccatgtgacaatctcatgcccaactcttccgct
ccagaaaaccaggtatctgaggtcaaccctagtataatagggactcaagtaaaatctgat
tctttttctactgattctgtgtcaattaatcaaaagaatgaactaaaggatactataatt
gctaataatgtcaaattagaacaagataatgttaggcaagagatggtggaagaaccatca
tccagaaatgatgtacctgtttatgatgaatcgcattcagtggatgttggagggctgcat
gaaaaaaagtcatctgttgaagcaaataacaacaatgttacgagtccagagttgaacaaa
accaatagtagtgatgatgtaggttattcagaaaagttgaacttggacagaagttctggt
gatgattctatggaagaggacttgcctgagattaggcaatatgattctaagtttaatgat
gaacttagtgacaaagttgagaataatgaagtccttaaggggaaggagcaaagcaaaaca
atagttgtgggtgatggcgtatccgcaagaaacagtgatacccaccaagatatgaacatt
agtactgtttccttgactgagaagcgaaaatatcctgaacaaacattagttgggaacaat
gagcctgcaaaaaggcaacgcagatggaacactgaggcagttaaaggagcagatctgcaa
agcactactcccagatctgctactacacccaaggacgggcaaattactctgaagcgcaac
ttatctaggtctaattcatctgcaactgatgatacacctaaagaacgcattgttccacca
tctcgaagagccccaacaaattccctcaggattgatcaattccttcgtccatttacccta
aaagcagtgcaagaacttcttgggaaaactgggagcgtcagcagtttctggatggaccaa
ataaagacccattgctatgttacttactcgtccactgaagaggccattgaaacacgaaat
gctgtgtataacttgcaatggcctacaaatggtgggcggctcttaattgccgagtttgtt
gatcctgaagaagtgaaaatgaagttagaagctcctcccactccaactgctgctgtcaac
agtgctccaatagttcctcccgcaccaccctcttcacagccggagccttcccctcgtcag
cacagggaacaacatcttccagttactctcccacctccaccaccattggtaaggccccca
ccagttgctagggaacaccttccatcgccaccgccccttcccgagaaagtggacccacct
attgtcactctagatgatctcttccgtaaaaccactgcaactcctcggatctattattta
cctttgtctgaagagcaagttgctgcaaaacttgcggcacagggtaagagtacaaggcag
tag

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