Medicago truncatula (barrel medic): 11409042
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Entry
11409042 CDS
T01716
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11409042
03036 Chromosome and associated proteins [BR:
mtr03036
]
11409042
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
11409042
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
11409042
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
11409042
microRNA pathway
RISC loading complex
11409042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
11409042
NCBI-ProteinID:
XP_024631680
LinkDB
All DBs
Position
2:30625769..30645325
Genome browser
AA seq
915 aa
AA seq
DB search
MHTESKTRTTLQMQMKDPEEHQVKSKPLQKCTERRRKSKKRRNQIKTEKSHETGVESKSS
LMFPCRPGYGQLGTKCLIKANHFLVDISVSDLSHYNVKIIPEVCSSKTRKAVISELVRVH
KNTDLANRLPVYDGGRNLYTAGLLPFTYKEFSVILSEEDYVTGGTREQEFKVGIKFATSV
RMQQLRELLSGKQVDTPQEALSVFDIVLKEVAAQSYISIGRNFYSPDLRKPQQLGGGIES
WRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKA
LRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGYTIKYSH
LPCLQVGSQRKLNYLPMEACKIVRGQRQTKGLNEKQITSLLKFSCQRPREQETDILQTIE
QNNYENNPYAKEFGISIDKKLASVEARVLPSPWLKYHDSGREKEHLPQVGQWNMLNKKVI
NGSNVRYWACINFSRSVQESTAHGFCQQLVQMCQITGLEFSQEPVIPVYSARPDQVKKAL
KYVHTTALDKLDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLAKYVFKINRQ
YLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHAESGDDSGPSIAAVV
ASQDWPEVTKYAGLVCAQPHREELIQDLFKSWKDPQRGVVYGGMIRELLLSFKRATGQKP
LRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRNHTRLFPNNHD
DRNSTDTSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSPDEI
QSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARCYMEPDHPEIAKLRDARSKDRAVRP
LPALKENVKNVMFYC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagagtcaaaaacaagaactacactgcaaatgcaaatgaaggacccagaagag
catcaagtgaaatcaaagcctctacaaaaatgtacagaacgtagaagaaagagcaaaaag
agaagaaaccaaatcaagacagaaaaatcacatgaaacaggagttgaatcaaagagtagc
ctaatgtttccttgcaggcctggttatggccaacttgggactaagtgtctcatcaaagcc
aaccattttcttgtagatatatctgtctctgatttaagccattacaatgttaaaataatt
cctgaagtttgttctagtaaaacaagaaaggctgtcatatctgagcttgtgagggttcat
aagaacactgatttagcgaataggcttcctgtgtatgatggaggaagaaatctttacact
gctggtttgcttccttttacttacaaagaattcagtgtgatattgagtgaagaagattat
gttaccggcggtaccagggaacaagaatttaaggtgggaatcaagtttgcaactagtgtt
agaatgcaacaacttagggaacttctaagtgggaaacaagttgacactccacaagaagca
cttagtgtctttgacattgttttgaaggaggttgcagctcaaagttacatatcaattggg
agaaatttctattctcctgatttgaggaaaccacagcaacttggtggtggcattgaatca
tggcgtggattttaccagagtataaggccaactcaaatgggattatcactaaacattgat
atgtcatcaatggcatttattgaaccactacctgtaattgacttcgttgctcaaattctt
gggaaagatgtgcactcaaaaccattgtcagatgcagatcgtgtcaagattaaaaaggcc
ttaagaggagtaaaagttgaagtcacacatagaggaaatttcagaagaaagtacagaata
tcaggattgacttcacaacccacaagggagcttatttttcctcttgatgagcaaatgaat
atgaaatcagtagttgattattttcaagaaatgtatggatatacgatcaaatattctcat
ttaccttgccttcaagtaggaagtcaaaggaagttgaactatttgcccatggaggcatgc
aagatagttaggggccaaagacaaacaaaaggactgaatgaaaagcaaataacttctttg
ttgaaattttcatgccagagaccccgtgaacaagaaacagacattttacagacaattgaa
caaaacaattatgaaaataatccatatgcaaaggagtttggcatcagcatagataagaag
cttgcatcagtggaggctcgggttcttccttctccttggttgaaatatcatgactctgga
agagagaaagaacacttgccacaagttggtcaatggaatatgctgaacaagaaagttata
aatggaagtaatgtaagatactgggcatgcatcaatttctcaagaagtgtacaagaaagt
acagctcatggattttgccaacagttggttcaaatgtgtcaaatcacaggcttggaattt
agtcaggagcctgtgattcctgtatattcagcaagaccagatcaggtcaagaaggctttg
aagtatgtacatactactgctctagacaaacttgatggtaaagagctagaattgttgatt
gccattcttccagacaataatggctctttgtatggtgatctcaaaagaatctgtgaaaca
gatttggggctgatttctcaatgctgccttgcaaaatatgtattcaagattaatagacag
tacttggcaaatgttgcactaaaaatcaatgtcaagatgggaggaagaaacacggtactt
ttggatgctttaagttggaggattccactggttagtgatattccaacaataatatttgga
gctgatgtaactcatgcagaatccggagacgatagtggcccatccatcgctgctgttgta
gcctcccaggactggccagaagtaacaaagtatgcagggttggtttgcgctcagcctcac
cgtgaagagctcatccaagatcttttcaaatcttggaaagatccacagaggggagtggtt
tacggtggtatgatcagggagcttttactctcgtttaagagggcaactggacaaaaaccg
ttgagaataatattttacagggatggggtaagtgaaggacagttctaccaagttttgttg
tatgagcttgacgccatccgaaaggcttgtgcgtctttggaaccaagttaccaacctccg
gtaacatttgttgtggttcaaaaacggaatcacactagactcttcccaaacaatcacgat
gacagaaacagcaccgataccagtgggaacatcttacctggtactgtggtggattcaaag
atatgtcatcctactgaatttgatttctatttatgcagtcatgcaggaattcagggtaca
agtagaccagcacactatcatgtcctctgggatgagaacaatttcagtccggatgagatt
cagtctttaactaacaacttatgctacacctatgcaagatgtacgcggtctgtttctgta
gtgcctccagcatactatgctcatttggcagcctacagagctcgatgctacatggaaccc
gaccatcccgagattgcaaaactgcgagatgcgagatcaaaagatagagctgttaggcca
cttcctgcattgaaagagaatgtgaagaatgtaatgttttactgttga
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