Medicago truncatula (barrel medic): 11409544
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Entry
11409544 CDS
T01716
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11409544
Membrane trafficking [BR:
mtr04131
]
Protein recycling
Others
EARP complex
11409544
Endosome - Golgi transport
Tethering complex
GARP complex
11409544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
COG7
Vps54_N
DUF401
XhlA
TSKS
MPH2
Motif
Other DBs
NCBI-GeneID:
11409544
NCBI-ProteinID:
XP_003594406
UniProt:
G7IFQ6
LinkDB
All DBs
Position
2:10494233..10507448
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AA seq
819 aa
AA seq
DB search
MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVKEELVNNFCNRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRSNEEIWKIFPSSWHVSYRLCILFCKKTRKQLEDILSNLKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTQNREIGNEIEEIGRSPNSSSNASDIRKKYEKKLAA
HQGSESEERDGSKDLAVPGAGFNFRGIVSSCFEPHLTVYVELEEKTLMDSLEKLVQEETW
DIEEGGQSSVLSSSMQLFLIIKRSLKRCSALTKSQTLFNLFKVFQKILKAYATKLFARLP
KGGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDHQFADGV
DMSEVQDEFSAVITRSLVTLVHGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNAINLIL
TTSIPTLGSLLSPVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKSML
LEIPSLGRQTSSATSYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGPGIKQTQITPAIAPAPPVAPVVPSPTAVGLVASREDVL
TRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatcaagcgcgttagagtatatcaatcaaatgttccccaacgaagcatcactc
tctggtgttgaaccgctaatgcaaaaaatccagaacgagattcgtaccgttgatgctgga
attttatctgctgttcgtcaacagagtaattcaggcactaaggctaaagaagatctcgct
gctgcaactcgtgctgttgaggaacttatgtataagattagagaaataaaaactaaagct
gttcagagtgaaacaatggttcaagaaatatgtcgggatattaagaaattggactttgca
aagaagcatataactacgacgattactgcccttcatcgtctcacaatgcttgtctctgct
gttgaacaactccaagtgatggcttcaaaacgacaatacaaagaggccgctgcacagctg
gaggcagtgaaccagctatgtagccactttgaggcctatagggatattccaaagatcata
gaactgagagagaagtttaaaaatatcaagcaaatactcaagtcgcacgttttttctgat
ttttctagcttaggcactggaaaggagaccgaagaaaccaatttgctacagcagttgtct
gatgcctgcctggttgttgatgcattggagccttcagtaaaggaagaattggtgaataat
ttttgtaatcgggagcttacttcgtatgagcaaatttttgaaggagctgaactagcgaag
ttggataaaactgaaagaagatatgcatggattaaacgacgaatgcgatcaaatgaagaa
atttggaaaatatttccatcttcgtggcatgtatcttatcgtctgtgtatcctattttgc
aagaaaactaggaaacaacttgaggacattctttctaatttaaaggaaaagccagatgtt
gggaccttgttgttggctttgcagcgaactttagagtttgaggatgagttggctgagaaa
tttgggggaggcactcaaaacagagagattggaaatgagattgaagaaataggaagaagt
cctaattctagtagtaatgcttcagatatccggaagaagtacgaaaaaaagcttgctgca
catcaaggaagtgagagtgaagaaagagatggaagcaaagatttggcagttcctggagct
gggttcaactttcgtggaattgtttcatcttgctttgaaccccatttaacagtatatgta
gaattggaagagaaaacattaatggatagtctggagaaacttgtccaggaggagacatgg
gatattgaggagggaggtcagagtagtgttttatccagtagcatgcagttgtttctaata
atcaagagaagcttgaagagatgcagtgctttgacgaagagccagacactatttaatttg
tttaaggttttccaaaaaattcttaaagcatatgctacaaaactctttgcaagactccca
aaggggggcacgggaattgttgctgcggctacaggcatggatgggcagataaagacatct
gatagggatgaacgagtgatttgttacattgtcaattcagctgaatattgccataaaacg
gctggtgaactggctgagagtgtttctaaaataattgatcatcaatttgcagatggggtg
gacatgtcagaagttcaggatgaattttcagccgttataacaagatcattggtaacctta
gtgcatggcctggaaaccaaatttgatattgaaatggcagcaatgacacgtgtcccttgg
ggtacccttgaaagcgttggtgatcaatcggagtatgttaatgccataaatttgattcta
accactagcattcctacacttggaagtcttctttcacctgtctactttcaattctttttg
gacaagcttgcatcttctctgggcccacgcttttactctaacattttcaaatgcaagcaa
atatcagaaactggagctcaacagatgctattggatacgcaggcagttaagtcaatgctt
cttgaaattccttcccttggtagacagacatcaagtgctacaagttattccaagtttgta
agccgtgagatgagcaaagctgaggcccttttgaaggttatactttctccagttgattct
gtagctgatacttaccgtgcactgctacctgagggtacacccatggaatttcagcggata
ttggagcttaagggacttaaaaaagctgatcaacaaagcatactcgacgattttaacaaa
catggtcctggaattaagcaaactcagattacacctgcaattgccccagctcctccggta
gctcctgtagtacctagtcccactgctgttggactcgtagcttcacgggaggatgttcta
actagagctgctgcacttggacgaggagctgccaccacagggttcaagcggttcctagca
ctaactgaagctgccaaagacaggaaggacgggcctttccggaagctctttaacccctaa
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