Medicago truncatula (barrel medic): 11409593
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Entry
11409593 CDS
T01716
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11409593
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
11409593
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
Fez1
YjdP
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
11409593
NCBI-ProteinID:
XP_003613413
UniProt:
G7K5K8
LinkDB
All DBs
Position
5:complement(15751811..15766994)
Genome browser
AA seq
1052 aa
AA seq
DB search
MAEPPRPSKRPKITRGEDDYMPGNIIEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSS
LVCAIALGLCGEPQLLGRATCVAEFVKEGKESGHIKITLRGEHIGDHITIMRKINISRKS
EWFLNGNIVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDTQ
LPEQHRALIDKSRALKHVELSLEKNEGTLNQLKERNAELEKDVERVRQRDELRAKAKLME
KKLPWLKYDMKQAEYREAKEREKTAAKESEKANKLLNELKEPIKKQNDEKDALAEKWRKV
SDRLIENADKRKGLLEKESQLEVELQGNYKEMDELRRHEETRQQKLRKARDELSAAELEL
ESLNHYVPPTDEINRLIDEIVESESSANQVGENKSLSEKLIKRKNFSLKNCKDRLKEMSK
KSYKCLLALKNSGVKEIFEAEKWVQEHRHEFHKEVYGPVLVEVNVPDQSHAKYLEGQLAW
YTWKSFITQDPRDRDFLVNNLQHYDVPVLNYTGRDSQQREPSEISPEMRAIGIHFRLDQI
FDAPDAVKEVLISQSKLDHSFIGSEETDQKAVEVPNLGISSLWTPENHYYWSKSRYGNHV
SAIVEQLQRPKLLVNNLNVRDIENLSQERELQEQIAHLEENIKRFQDEEKRLRNQAANLR
KQKEDLSTRALNEQEKQQAIIRRIEQKKVILKSMEEQDDLDTGLAKLADQATKCNILRFH
NAIKVKDLLVEAARYGRSYVVQGMAFIEFAAKIGDMEANLKQHENFARQASEHFNKSKKE
AEECKQKLTDLLNNAKSIAPLTPDLQKEFLEMPTTIEELEAAIQDTTSQANSMLFMNPHI
LQQYEDRQRQIEDLAKKLDMDKKEATKCRSELETIKEKWLPTLRNLVAQINETFSRNFQQ
MAVAGEVSLDEHDMNYDQFGILIKVKFRENGQLKVLSAHHQSGGERSVSTIVYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN
VMNGPWIEQPSKACASGDRWSIITGHVGEISC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccacctcgtccatcaaagcgccctaaaatcaccaggggggaggatgattat
atgcctggaaacattatagagatagaacttcataatttcatgacatttgattacctaaaa
tgtaaacctggacctcggttgaatcttgtaattggtcccaatggttctggaaagagttct
cttgtatgtgcaattgctcttggcctatgcggcgagccccagttgcttgggcgagccacg
tgtgttgcagaatttgtgaaggagggaaaagagtccggccacattaagattaccttaaga
ggggagcatataggggatcacattacaattatgcgtaaaatcaatatcagccgcaagtcc
gaatggtttttaaacggaaatattgtgtccaaaaaggacgtggctgaaaccattcagagg
tttaacatccaagtaaataatttgactcaatttttaccgcaagacagggtctgtgagttt
gcaaagttaactcccgtgcaacttctggaagagaccgaaaaggctgttggtgatacgcag
cttcctgagcaacatcgtgcactgattgataaaagtcgtgcattgaagcatgttgaacta
tctcttgagaaaaatgaaggaactttgaatcagttgaaggaacgtaatgctgagttagag
aaggatgttgaacgtgttcgtcaaagagatgaacttcgtgccaaggcaaaattaatggaa
aagaaattgccatggttgaagtatgatatgaagcaggccgaatatcgtgaagctaaggag
cgtgagaagactgccgcaaaggaatctgagaaggctaacaaattattaaatgaacttaaa
gaacctatcaagaaacaaaatgatgagaaagatgcattagctgaaaaatggagaaaggtt
agcgaccgactaattgagaatgcagataagagaaagggactattggagaaagagagccaa
ttggaagtggaattacaaggaaattacaaagagatggatgagttgagaaggcacgaagaa
actcggcagcagaaacttagaaaagctagggatgaactttctgctgctgaacttgaactt
gagagtctaaaccattatgtacctcccacggatgagattaatagactgatagatgaaatt
gtggagtcggaaagttctgctaatcaagtgggagaaaataagtcactatcagaaaaacta
attaaacgaaaaaacttctccttgaagaattgtaaagacaggttgaaggaaatgagtaaa
aaaagttacaagtgtttacttgcattgaaaaattctggggttaaagaaatatttgaagct
gaaaaatgggtccaagagcatcgtcatgaattccacaaggaggtttatggcccagtttta
gttgaggtaaatgtcccagatcagtctcatgctaaatatctagagggtcaacttgcttgg
tacacttggaagtcttttataacacaggatcctcgtgatcgagactttttggtgaacaac
ctacaacattatgatgtgccggttttaaattatactggtcgtgatagccaacaaagagag
ccttctgaaatttctcctgaaatgcgtgctattggtattcatttccgtttggaccaaatt
tttgatgctcctgatgctgtcaaggaggtgttgattagccaatctaaacttgatcattcg
tttattggatcagaagaaactgatcagaaagccgttgaggtcccaaacttgggaatttct
agtttatggacacctgagaatcactattactggtcgaagtctagatatggaaatcatgtc
tcagcgattgttgagcaattgcaacgcccgaaacttctagtgaataatttaaatgtgagg
gacattgagaatctgagccaggaaagggagctgcaagaacaaattgctcacctggaggaa
aatatcaaaaggtttcaagatgaggagaaaagattaaggaatcaggctgctaatcttcgt
aaacagaaggaggaccttagtacgagagcactgaatgagcaagaaaaacaacaggcaata
attaggcgtattgaacaaaagaaagtgatactgaaatcgatggaagagcaggatgattta
gataccgggttagcaaagcttgctgatcaggcaacgaaatgtaacattttgcgattccat
aatgcaattaaagttaaggatcttcttgttgaagctgcgcgttacggacgaagttatgtt
gtacagggaatggctttcattgaatttgctgcaaagattggagacatggaggccaatctg
aagcagcatgaaaattttgcccgtcaagcatcagagcactttaataaatctaagaaagaa
gctgaagaatgtaaacagaagcttacagatttattaaacaatgctaaatcaattgcccct
cttacacctgacctacagaaggaatttctcgagatgcctactacaattgaggagttggaa
gcagctatccaagatacaacatctcaagctaattcaatgctttttatgaatcctcacata
ttgcaacaatatgaggatcgtcaaagacagatagaagatcttgcaaaaaaacttgacatg
gacaagaaggaagctacaaagtgtcgttctgaattggaaaccattaaggaaaagtggctt
ccaactctcagaaatcttgtggctcagataaatgaaacttttagtcgaaattttcaacag
atggctgttgccggagaagtttcactagatgagcatgatatgaactatgatcaatttgga
atacttataaaagtcaaattcagagaaaatggacagcttaaagttctcagtgcccatcat
caatctggaggggagcgatcagtttcaacaattgtttatcttgtttcccttcaagatctt
acaaactgcccatttcgagttgttgatgagattaaccaaggcatggacccaataaatgaa
aggaagatgtttcagcaactagtgagagcagcaagcaagccaaatacaccacagtgtttc
ttacttacaccaaagctgttaccagatctgcaatatagtgaggcatgcagtatattgaat
gtaatgaatggcccttggattgagcaaccctcaaaggcctgcgctagtggtgatcgatgg
agtattatcactggacatgttggagagatttcatgttaa
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