Medicago truncatula (barrel medic): 11409629
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Entry
11409629 CDS
T01716
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11409629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11409629
03012 Translation factors [BR:
mtr03012
]
11409629
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
11409629
Translation factors [BR:
mtr03012
]
Eukaryotic type
Release factors
11409629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
11409629
NCBI-ProteinID:
XP_003631062
UniProt:
G7LD89
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All DBs
Position
8:complement(49170453..49182966)
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AA seq
497 aa
AA seq
DB search
MDIEEDIRSLQLDSAEDINGVVNPEHEMPDVDEMDEDPKEEVQAQAVEAGPKAKDKEIPS
VQDEEVEQTEKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESW
YMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVL
VISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKM
IPFLKQSGYNVKKDVLFLPISGLMGSNLKTRMDRSICSWWDGPCLFEALDSIEVPMGDPK
RPFRMPIIDKFKDMGTVVMGKVESGTIREGDSLFIMPNKDQVKVVAIYIDENRVKRAGPG
ENLRVRLSGVEEEDILTGFVLSSVANPISAVTEFVAQLAILELLDNAIFTAGYKAVLHIH
SVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVLCRVQVSNMICVEKFSDFPQLGRF
TLRTEGKTIAVGKVTAL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggaggacattcgttctttacagcttgactcagcagaagatattaatggg
gtggtaaatccagagcatgaaatgccagatgttgatgagatggatgaagatccaaaggag
gaggttcaggctcaggctgttgaggccgggccaaaagcgaaagataaggaaattccttct
gttcaagatgaagaagtcgagcaaacggagaaaagacacttgaatgttgtgtttattggg
catgttgatgctggcaagtctacaactggaggccagatacttttcctcagtggtcaggtt
gatgatcgaactatccaaaaatacgagaaagaagctaaggacaaaagtcgagaaagctgg
tacatggcttatattatggacacaaatgaggaggagagagtaaaggggaagactgttgaa
gttggaagagcacattttgagacagagacaacaaggttcaccattttggacgcacctggc
cacaagagctatgttcctaatatgatcagtggtgcatctcaagctgatattggagtgttg
gtaatttctgctcggaagggagagtttgaaactggatatgagagaggtggacaaactcgt
gaacatgtccagcttgcaaaaacattgggtgtgactaagctgcttgtggttgtcaataaa
atggatgatcctacagtaaattggtccaaagaaaggtatgatgagatcgagtcaaagatg
attccatttctaaagcaatcaggatacaatgtaaaaaaagatgtcttgtttttaccaata
tcggggctcatgggttcaaacttaaaaacaagaatggatagaagcatttgttcatggtgg
gatgggccttgcttatttgaagcccttgatagtatcgaagttcctatgggagaccccaaa
agacctttcaggatgcctataattgacaaattcaaagacatgggaactgttgttatgggc
aaagttgaatctggtactattcgggagggagattcccttttcatcatgccaaataaggat
caagtaaaagttgttgctatatatattgatgaaaatcgggttaaacgcgctggacctggt
gaaaatttacgcgttcgattatctggtgttgaagaagaagacatattgactgggtttgtc
ttgtctagtgttgcaaatccaatatcagcagttactgagtttgttgctcagttggcaatc
cttgaattactagacaacgctatttttactgctggatacaaagctgttctgcacatccac
tctgtagttgaggaatgtgagattgttgagctattacaacaaattgatccaaagacaaag
aagcccatgaaaaagaaagttctatttgtaaagaatggtgctgttgtattatgtcgtgtt
caggttagtaacatgatatgcgttgagaagttctccgattttccacaactagggaggttc
actcttcgcactgaaggaaaaactattgctgtgggaaaagtcactgctctgtga
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