Medicago truncatula (barrel medic): 11409720
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Entry
11409720 CDS
T01716
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11409720
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11409720
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11409720
NCBI-ProteinID:
XP_003629509
UniProt:
G7LFJ8
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Position
8:35851857..35853546
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AA seq
352 aa
AA seq
DB search
MNVIDQCWRFNPEWRKHRQQLANCSVGYAGKMTNNIGKDLIHYKVTDHSDHPLNPTPGTL
RYGASKIQGKVWITFQRDMDIKLVKPLLISSFTTIDGRGVDIHIADNACLMIYKETNIII
HGIRVHHCRPQAPGMVMGSDGKIIALGQVDGDAIRLVSASKIWIDHSTLYDCQDGLLDVT
RGSTDITISNNWFREQNKVMLLGHDDGFVRDKNMKVTVIYNYFGPNCHQRMPRIRHGYAH
VANNLYMGWVQYAIGGSMEPSLKSQSNLFIAPTTGKKEVTWRKSSNGIGDTWEFYSVGDA
FENGASFIETKGGQVIKPNYKLEQNFKVVDAKFVRSLTRSSGVLQCSKTSIC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatcgatcaatgttggagatttaatcctgaatggaggaaacatcgacaacaa
cttgctaattgctcggtgggatatgcgggaaaaatgacaaacaacattggtaaagactta
atccattataaagttaccgatcacagtgatcaccctttaaatccaacacctggaaccttg
agatatggagcttctaagattcaaggtaaagtttggatcacattccaaagggatatggac
attaagcttgtgaaaccccttctcatcagtagtttcaccaccattgatggtcgaggcgtc
gatatccacattgcagataatgcgtgtttgatgatatataaggaaaccaacataatcatc
cacggaataagggttcatcattgtcgacctcaagctcctggaatggtgatgggttccgat
ggaaagataattgcattaggtcaagttgatggagatgcaattagattggtttctgcttca
aaaatttggattgatcatagcacactttatgattgtcaagatggtcttttagatgttaca
cgaggttccactgatataacaatctccaacaattggtttagagagcaaaataaagttatg
cttcttggtcacgatgatggatttgtgagagacaaaaacatgaaagtcaccgttatatac
aactattttggacctaattgccaccagcgcatgcctagaattcgtcatggatatgcacat
gttgcaaataatctgtacatgggatgggtgcaatatgcaataggtggaagtatggaacca
agccttaaaagccaatcaaacctcttcatagcaccaaccacaggaaaaaaggaggttaca
tggaggaaaagtagtaacggaattggagatacatgggaattttattcggttggagacgct
tttgaaaatggagcatccttcattgaaacaaaaggtggacaagtgataaaaccaaattat
aaacttgaacaaaattttaaagttgttgatgccaaatttgtaagatcattgacaagatca
tctggtgtattgcaatgtagtaaaacctcaatatgttga
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