Medicago truncatula (barrel medic): 11409901
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Entry
11409901 CDS
T01716
Name
(RefSeq) heat shock factor protein HSF24
KO
K09419
heat shock transcription factor, other eukaryote
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11409901
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
11409901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
CCDC18_1st
XRCC4_CC
HALZ
Geminin
ANKRD40_UBL
bZIP_1
USHBP1_PDZ-bd
Seadorna_VP6
WHD_PriA_bact
NAM-associated
Motif
Other DBs
NCBI-GeneID:
11409901
NCBI-ProteinID:
XP_003611751
UniProt:
I3SQU1
LinkDB
All DBs
Position
5:6393016..6395597
Genome browser
AA seq
288 aa
AA seq
DB search
MSQRSAPAPFLLKTYQMVDDLATDDVISWSESGESFVVWKHADFARDLLPKYFKHNNFSS
FVRQLNTYGFRKLVPDKWEFSNENFKRNHKHLLTDIKRRKTISQSSSQPVEVEKTSVNDN
SPSNSGNDGVGSTSTSSSNSKNPGSVETTTLPQCVNLSSENEKLKKDNETLNCELARAKK
QCEELVAFLKDNLNVGPDQIDRIMKQQGNCCESVQNAVGENEESGRDCLKLFGVWLREEN
YTNERNNKKRGCEDQLSFGGPRAKVGNNVVDFSAVNVVNMMKSGKVCN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcggtcggcgcctgcgccgtttttgttgaagacgtatcagatggtggatgat
ttagcgacggatgatgtgatatcatggagtgagagtggtgaaagttttgttgtgtggaaa
catgctgattttgcaagggatttgcttcctaaatattttaagcacaacaatttctctagc
tttgttcgtcagcttaatacttatggattccgaaagctggtgccagacaaatgggaattt
tcaaacgagaatttcaaacgaaaccacaaacacctcctcactgatatcaaacgccgcaaa
accatctcacaatcgtcgtcacaacccgtagaagtcgaaaaaaccagcgtcaatgacaac
tctccgtcaaactctggcaacgacggagtaggatccacctcaacctcttcctccaattcc
aaaaaccctggatcagtggaaacaacaacacttcctcaatgtgtcaacttatcgagcgaa
aatgagaaactaaaaaaagacaacgaaaccttaaattgtgaattggcacgtgcaaagaaa
caatgcgaagagttggtggcttttttaaaagacaatttaaatgtgggtccagatcaaatc
gatcgcataatgaagcaacaaggaaattgttgtgaatctgttcaaaatgcggttggtgaa
aatgaagaaagtggaagagattgtttgaaattgtttggtgtttggttgagagaagaaaat
tacacaaacgaaagaaacaataagaagagaggttgtgaagaccaattgagctttggtggg
cctcgagctaaagtgggtaacaatgttgttgactttagtgctgttaatgttgtgaacatg
atgaaaagtggcaaggtttgtaactga
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