Medicago truncatula (barrel medic): 11410037
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Entry
11410037 CDS
T01716
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
11410037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11410037
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
11410037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11410037
NCBI-ProteinID:
XP_003606365
UniProt:
G7JND2
LinkDB
All DBs
Position
4:29838372..29844340
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AA seq
258 aa
AA seq
DB search
MAGKSGTTPATYSPSLTTGKKKPLLLKEEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAY
AEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLHKA
LEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCLG
KNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAK
IMRSCLKESASDAQDESS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccggtaaaagtggaacgactccggcgacatactcaccgtctctgacaaccggtaaa
aagaaaccactgcttctcaaggaagaagattggacccgacccgatggccgtggtttccac
cagtgtagacccgcttttttcaggactggtgctgtgaatgctgcatcaggatctgcttat
gctgagtttggaaataccaaagtcattgtatctgtgtttgggccaagagagagcaagaag
gcaatgatgtacagtgatacagggcgtctgaattgcaatgtcagctatacaacgttttca
actccagttcgtggacagggttcagaccacaaagaatacagttcgatgcttcataaagct
ttggagggtgcaataatattggattcttttcccaagaccactgtggatgtttttgcattg
gtgctggaatctagtggcagtgatctcccagttgtcatatcggttgctagtcttgccttg
gcagatgccggaatactgatgtatgaccttgttgcctcagtttcagtgtcatgtctcggc
aagaacctcgtcattgatcctatatttgaggaggaaaactcccaagatggaagcttaatg
attacttgcatgccatctcgctatgaaattacccaactgacagttaccggcgaatggtcc
accccaaagattaatgagggaatgcagctgtgcttggatgcttgtgcaaagcttgctaag
attatgaggtcatgtttgaaagaatctgcttctgatgcacaggatgaaagctcttag
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