Medicago truncatula (barrel medic): 11411021
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Entry
11411021 CDS
T01716
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11411021
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
11411021
REST complex
11411021
Heterochromatin formation proteins
Other heterochromatin formation proteins
11411021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
TPPII_C
Mann_GBD_bact
Motif
Other DBs
NCBI-GeneID:
11411021
NCBI-ProteinID:
XP_003628621
UniProt:
G7LEQ2
LinkDB
All DBs
Position
8:complement(28698997..28717827)
Genome browser
AA seq
1406 aa
AA seq
DB search
MKRSRDDGYMSSQLKRPVLSSRGEPSGQAQVMTGGQKLTTNDALSYLKAVREMFQNDKEK
YDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSDDEQPLQ
KKPVEFEEAINFVGKIKNRFQGNDRVYKTFLDILNMYRKELKPITAVYQEVSALFQDHGD
LLEEFTHFLPDTSGAAAAHFASARNPLLRDRSSAMTTGRQMHVDKREKTTTLHADRDLSV
DHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDYDNDGNLERLPHKKKSVH
RATDPGTAEPLHDADEKLDLLPNSSTCEDKSSLKSLCSPVLAFLEKVKEKLKNPDDYQEF
LKCLHIYSREIITRQELLALVGDLLGKYADIMEGFDDFVTQCEKNEGFLAGVMNKKSLWN
EGHGQKPLKVEEKDRDRGRDDGVKERDRELRERDKSTGISNKDVSIPKVSLSKDKYVGKP
INELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKVLNDHWVSVTSGSEDYSFKHMRK
NQYEESLFRCEDDRFELDMLLESINATSKKVEEIIEKVNDDIIPGDIPIRIEEHLSALNL
RCIERLYGDHGLDVMEVLKKNASLALPVILTRLKQKQEEWARCREDFNKVWAEIYAKNYH
KSLDHRSFYFKQQDTKSLSTKALLGEIKEISEQKRKVDDVLLAIAAGNRRPILPNLEFEY
PDPEIQEDLYQLIKYSCGEVCSTEQLDKVMKIWTTFLEPMLGVPSRLRVPEDTEDAVKAK
KDSAKTGTASIAKGDSSPGVGATVMSPKNTFEQSNSCKEWQTNGVGGVKEDDCLKSDRSV
PKTETLGSSTLQGNVHINASIPDEVSRVNKQDHSIEQLVNANVSMSSRVEQSNGRTNINN
ASGLAATLSRPGYVYREGGLDLPSSEGADSTRPDTSTNGAIIEDTKAHRCHKESVGHFKS
EREEGELSPNGDFEEDNFAVYANAGLEAVHKGKDCNTSQHYQNRREEQICGVAGGENDDE
SDGSPHRSSDDSENASENGDVSGTESADGEECSREEHEEDGDHDNKVESEGEAEGMADAN
DVEGDGASLPYSERFLLTAKPLVKYVSPVFHGKEENVQIFYGNDSFYVLFRLHQTLYERI
RSAKINSSSAEKKWRASNDTSSTDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYV
LFTLDKLIYKLVKQLQAVASGTDEMDNKLLQLYAYEQSRKSGSFFDVVYHENARVLLHDE
NIYRIECSPTRLSIQLMDYGHDKPEVTAVSIDPNFSTYLHNDFLSVVPDSKEKSGIFLKR
NKLKCARSDELSSQVMDGIQVINGLECKIACGSSKVSYVLDTEDSLIRTKRKRGSLHQNN
SYCGPTMSSNTCSSRVQRFYKLFSIK
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcaagagatgatggttacatgagttcacagctcaaacgccctgtgctgtct
tctagaggagaaccttcggggcaagcccaagtgatgactggtggccagaagttaaccaca
aatgatgccttatcatatctcaaggcagtaagagaaatgtttcaaaatgacaaggagaaa
tacgatgaatttttggaagtcatgaaggatttcaaggcccaaagaattgatacagctggt
gtcatagaaagagtgaaggagctgtttaaagggcataaagatttgattttgggatttaac
acctttttgccaaagggatatgcaatcacactcccatcggatgatgaacagcctctacaa
aagaagcctgttgaatttgaagaggctataaattttgtgggcaagattaagaatcgtttt
caaggcaacgatcgcgtgtataagacttttttagacatactaaatatgtatagaaaggaa
ctcaagcctatcaccgcagtttaccaagaggtttctgctctcttccaagaccatggagat
cttctcgaggagtttactcattttcttcctgatacttcaggagcagccgctgcacatttt
gcttctgctcgtaatcctctccttcgagataggagctctgcaatgacaacagggaggcaa
atgcatgttgacaagagagaaaagacaacaactttgcatgctgatcgcgatctcagcgtt
gatcatcctgatccagaacttgacagaggtgtgatgaggactgataaggagcagagaaga
cgtgagagagaaaaggaccgtagagaagaaagagataggagagaacgtgaaagggatgat
agagattatgataatgatggtaatctggagcgtttaccccacaagaaaaagtctgttcat
agagctacggaccctggtactgctgaaccattgcatgatgcagatgaaaagctcgacctt
ctccctaactcgtccacttgtgaggataaaagttctttgaaaagtttgtgcagtccggtg
cttgctttccttgaaaaagtcaaggagaagttaaaaaatcctgatgattaccaggaattt
ttgaagtgcctgcatatctacagcagggaaataatcacccgacaagaactactggcattg
gtgggtgatttactgggaaaatatgccgatattatggagggatttgatgattttgtgaca
caatgtgagaagaatgaaggattccttgctggtgtcatgaataaaaaatctttgtggaat
gaaggacatgggcagaaaccactgaaggtagaggagaaggacagagatcggggcagggat
gatggggtgaaagaaagggaccgggaactccgagaaagagacaaatccactggaatttcc
aacaaggatgtctctattcctaaggtgtctctaagcaaggacaagtatgtaggaaagcct
ataaatgaactggacctttctaactgtgaacaatgtactcccagctaccgtctcctaccc
aaaaattacccaataccattagctagccagaaaactgaacttggcgccaaagtattgaat
gatcactgggtttctgtaacgtcaggaagtgaggattattcctttaaacacatgcgcaaa
aatcagtatgaagagagcttgtttagatgcgaagacgacaggtttgaacttgatatgttg
ttagagtctataaatgcaacaagtaagaaagttgaagagatcatagaaaaagttaatgat
gatataattccaggagatattccaattcgtattgaggagcatttatcagctctaaatctt
aggtgcattgaacgattatatggtgaccatgggcttgatgtgatggaagtgttgaaaaag
aatgcatctctagccttgccagtgatattaacccgcctgaagcaaaaacaggaggagtgg
gcaagatgccgtgaagattttaataaagtttgggctgaaatatatgcaaagaattatcac
aaatcacttgatcatcgaagtttttactttaagcagcaggatacaaaaagcttgagcact
aaagccttattgggagagatcaaagaaattagcgagcagaaacgaaaagtagatgatgtt
cttcttgcaattgctgctggaaatagacggcctattcttcctaacttggaatttgagtat
cctgatccagagattcaggaagatctgtatcaactcataaaatattcatgtggagaagtt
tgttcaaccgaacaattggataaagtcatgaagatttggacaacatttttagaacccatg
ctcggtgttccttctcgactgcgtgttcccgaagacacagaagatgctgtcaaggccaag
aaagattctgcaaaaactggtactgcaagtattgccaagggtgatagtagtcctggtgtt
ggtgctaccgtaatgagtcctaagaatacatttgaacaatcaaattcttgcaaagaatgg
caaacaaatggggttggcggggttaaagaggatgattgtctcaaatcagaccgttctgtg
cctaaaactgaaactttgggaagtagtaccctgcagggtaatgttcatataaatgcatcc
attcctgacgaagtatcaagagtcaataagcaagatcattccattgaacagttggtgaat
gctaatgtctcaatgtcctctagagtggagcaaagtaacggaagaacaaacataaataat
gcatcaggacttgctgcaactctgtctagacctggttatgtttatagagagggagggctt
gatttaccttcatcagagggtgctgattctacaagaccagatacgtccacaaatggggcc
atcatcgaagacaccaaagctcacagatgtcacaaagaatcagttggacacttcaaaagt
gaaagagaagagggtgaattgtctcctaatggagactttgaagaggataactttgcagtt
tatgcaaatgctggtctggaggcagtgcataaaggaaaagattgtaataccagtcaacac
taccaaaatagacgcgaggaacaaatttgtggggtagctggaggtgaaaatgatgatgaa
agtgacggaagtcctcatagatcatcagacgacagtgaaaatgcatctgagaatggtgat
gtttctggtactgagtctgctgatggtgaggaatgttctcgagaagaacatgaagaggat
ggcgatcatgataacaaggtcgagagtgaaggtgaagctgaaggaatggctgacgccaat
gatgttgaaggagatggagcctcgctgccatactcagagcgctttcttcttactgcaaag
cctcttgtaaaatatgtcagcccggtgtttcatgggaaagaagagaatgttcaaattttt
tacggaaatgattccttttatgtgctgtttagacttcatcagacattgtatgagagaata
cgatcggcaaagattaactcatcttctgctgaaaagaaatggagagcttcaaatgataca
agttccactgatcgatatgccaggttcatgaattctctttacagtttactggatggttct
tctgataattcaaaatttgaagatgactgtcgggctattattggaactcagtcgtatgtc
ttgttcacgttagacaagctgatatataaacttgttaagcagcttcaagctgttgccagt
ggcactgatgagatggataacaaacttcttcaactatatgcatatgaacaatcaagaaaa
tctggaagcttttttgatgtagtttatcatgaaaatgcccgtgttcttcttcatgatgag
aacatatatcgtattgaatgttcacctacccgattgtctattcagttgatggactatgga
catgataagccagaagtgactgctgtgtcaatagatcctaatttttcaacctatttgcac
aatgatttcctatctgttgtccccgacagtaaggagaagtcaggaattttcttaaaaagg
aataaactaaaatgtgccaggagtgatgaactttcaagccaggttatggatggaatacaa
gttatcaatggtttggagtgtaaaattgcttgcggttcatccaaggtttcatacgtttta
gataccgaagactctttgattcgaacaaaaaggaaaaggggaagtttgcatcagaataat
tcatattgtgggccgacaatgtcttcaaacacttgttcaagcagagtacagcggttctac
aaattattttccatcaaatga
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