Medicago truncatula (barrel medic): 11411043
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Entry
11411043 CDS
T01716
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11411043
03036 Chromosome and associated proteins [BR:
mtr03036
]
11411043
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
11411043
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
11411043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
CTD2
Motif
Other DBs
NCBI-GeneID:
11411043
NCBI-ProteinID:
XP_024637740
LinkDB
All DBs
Position
1:complement(39614055..39641916)
Genome browser
AA seq
1368 aa
AA seq
DB search
MKQAGREVQKRSRWLLIPFCNGRNPVILPDMEGIPEDEVVNIESASGGSANDDSDDEGSS
PSDIDDKLHLEEPLSEAEIEDLISELLEVESKAAEAQETLEEESLAKVESEVRQELEQTL
QGDDLETAVADEMAAFKEEWEAALDDLETESSHLLEQLDGAGIELPSLYKLIEREAPDRC
CTEAWKKRNHWVGSQATTEIASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPE
TLEPGKKETEGDWDVFNKIISDESGIDASFGSKTWASVYLASTPQQAALIGLEFPGVNEV
EEIDDIDGNSTDPFVAAAIANEKELDLSEEQRRQFKKVKEEDDAIVDRKLQVRLKHRRHR
KKSKQRETSTPILSMESHAQKSSSVDQFNPDTKEGTSDEGEILSDNNKAAGLNMEATKIK
GFDANFHLDNEKPMGDGNLQDPPKYPLGDDIEQRGTKRLNDGELDADKKKGRADIMNSDD
DIPVSSSGSSDSDDSDDSDDSDDSDDSETNVSISTKRRRKKKIRRILDDTELGEETKKKI
AIEKERQERLKSLRVQFSASSFDTSSAGCNGSSSEGASIEILGDALAGYIVNVVREKGEE
AVRIPPSISAKLKAHQIAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF
LYTAMRSVDLGLRTALIVTPVNVLHNWRTEFIKWAPSELKRLKVFMLEDVSRDRRAQLLA
KWRAKGGVLLIGYAAFRNLSFGKHVKDREMARELCHALQDGPDILVCDEAHIIKNTKADV
THALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN
STQTDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFI
DVHGFSNVKENQENLRKRSFFAGYQALARIWNHPGILQMAKEDKECVRPEDVVENLLVDD
ISSDDSDSNVLAGEKLKYTNDLPPRKDGNGFFIKGWWKDILQGKIFKEIDQSGKMVLLID
ILTMSSDVGDKVLVFSQSIPTLDLIELYLSKLPRSGKRGKLWKKGRDWYRLDGRTESSER
QKLVERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYG
QKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGEDEN
PETLAELSEQSNPILAGDSLKHTVPHSNGSSYSDKLMESLLGKHHPRWIANYHLHESLLQ
ENEEEKLSKEEQDMAWEVYRKSLEWEEVQRVPIGESVPDPKPEVSKAEEEQPEVETWQLS
TKLRNRFTKRQCTNLAHLLTLRSQRIKIGGYTVCGECARVVRWEDLKK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagcaggaagagaagtccaaaaacggtcacggtggctgctgataccgttttgt
aacggccgcaatcccgtaattttaccagatatggagggaatacctgaggatgaagtggta
aatattgagagtgcttctggtggttctgcaaatgacgactcagacgatgagggatcttcg
ccttctgatattgatgacaaattgcatcttgaggaacctctatcggaggcggaaatagaa
gaccttatttctgagctgttagaagtggagagtaaggctgcggaggcccaagaaactctt
gaagaagagtctcttgccaaagtggaaagtgaagttagacaagaattggagcaaactcta
cagggggatgatctggaaactgctgttgctgatgagatggctgcttttaaagaagagtgg
gaagctgctctggatgaccttgaaactgaaagttcccacttactggaacaacttgacggg
gctggaattgagctcccaagcctttataagttgattgaaagagaagctccagatcgttgt
tgcactgaagcatggaaaaagcggaatcattgggttgggtctcaggcaactactgaaatt
gcttcgtcagtttctgatgctgaaaagtatctacaaataaacagacctgttagaaggcga
catggcaaattattggaagagggtgctagtggctttctccaaaaaaaaatttctcctgaa
accctggaacctggaaaaaaagaaactgagggggactgggatgtgttcaataaaataatt
tctgatgagagtggtattgatgcctcatttggcagtaagacttgggcttctgtttatttg
gccagcactccacagcaagctgccttgataggactcgaatttcctggagtcaacgaggtg
gaagaaattgatgatattgatggcaattctaccgatccgtttgttgcagcagccattgct
aatgaaaaagaattagatctttctgaggagcaaagaagacaatttaaaaaggtcaaagaa
gaggatgatgcaattgttgataggaagcttcaagtacgtttgaaacacagaagacatcga
aaaaaaagtaaacagcgagaaacaagtacacctatcctgtcgatggagagccatgcacag
aagtcttcatctgttgatcaatttaaccctgatacaaaggaaggaactagcgatgaaggg
gaaattctgtctgacaataacaaggctgcaggtttgaatatggaggccactaagattaaa
ggttttgatgccaattttcatcttgacaacgaaaagcctatgggagatggtaatttgcaa
gatcctccaaaatatcctttgggtgatgatattgaacagagaggaaccaagcgtctaaat
gacggtgagcttgatgctgataaaaagaaggggcgggctgatatcatgaacagtgacgat
gatatacccgtttccagttctggtagtagtgattcagatgattcagacgactcagacgat
tcagacgattcagatgattcagagacaaatgtttcaataagcactaaacgaagacgcaaa
aagaagattaggaggatacttgatgacactgaattgggagaagaaacaaaaaagaaaata
gcaattgaaaaggaacgtcaagaacgcctgaagtctttgagagtacagttttctgcttca
tcgttcgacactagctctgctggctgtaatgggagttcatccgaaggtgcaagcattgaa
attcttggtgatgcactggcaggttatatagtgaatgttgtgagagaaaaaggtgaagaa
gcggttagaatacctccgagcatttcagcaaagctgaaggcccatcagattgccggaata
agattcatgtgggaaaatataatacagtcaatcagaaaagttaagtctggagataaaggt
ctagggtgtattctagcacataccatgggcctgggtaaaacatttcaggtaatagctttc
ttgtatacggcaatgagaagtgttgatttgggtttaagaactgcacttatagtcacacct
gtaaatgtgctacataattggaggacggagttcatcaaatgggcaccatcagaattaaag
cgactaaaggtcttcatgctggaagatgtatcaagagataggagggcacaattgctcgcc
aaatggagagcgaaaggtggtgtattgttaatcggctatgctgctttccggaatttgtct
tttggaaagcacgtgaaagaccgggagatggccagagaactttgccatgctttgcaggat
ggccctgacattcttgtgtgtgatgaagcccatatcattaaaaatactaaggctgacgtt
actcatgccttgaaacaagtaaagtgccagagaagaattgcacttacaggatcacctctt
caaaacaatctcatggaatattattgtatggttgattttgtacgagaaggttttcttgga
agcagtcatgagtttaggaaccgcttccaaaatcctatagagaatggtcaacacactaat
tccactcagactgatgtaaaaattatgaaccaaaggtctcacatcctctatgaacaatta
aaaggctttgtccaaagaatggacatgaatgttgtgaagaaggacctaccgcccaaaact
gttttcgtgataacagtcaagctttctcccctacaaagaaaattgtacaagagattcatt
gacgtgcatgggttctctaatgttaaggaaaatcaggaaaatttaagaaagaggagtttt
tttgctgggtatcaggcattggctcggatatggaaccaccctgggattttgcaaatggca
aaagaagacaaggaatgtgttagacctgaagatgttgttgagaatttacttgttgatgat
atctcaagtgatgattccgattctaatgtgcttgctggagagaagttgaagtatacaaat
gatttgccaccaaggaaggatggtaatggatttttcataaagggctggtggaaagatatt
cttcagggcaaaatttttaaagagattgatcaaagtggcaaaatggttttactaattgat
atactcaccatgagttctgacgtgggtgataaggtattagtttttagtcagagcatacca
accctagacctcatagaactatatctctcaaagctaccacgaagtggaaagcgagggaag
ctgtggaagaagggaagagattggtataggctggatggaaggacagagagctcggaaagg
cagaagcttgttgagagatttaatgagcctctgaataaaagggttaaatgcacacttatt
tcaacccgagcaggctctttgggtattaatcttcatgcagctaatcgtgttgttatagtt
gatggttcttggaatccaacatatgatcttcaggctatctatcgagcttggaggtatggg
cagaaaaagcccgtgtttgcttatcggttgctggctcatggaactatggaagagaaaata
tataagcgccaggttacgaaagaggggcttgctgctagagtggtcgatagacaacaggtg
cataggaccatatctaaagaagaaatgctgcatctctttgaatttggtgaagacgagaat
cctgagactttggctgaactaagtgaacaaagtaatccgattttggctggggattcactg
aaacatacagtaccacattcaaatggaagcagttattctgataagttaatggaaagctta
ctaggcaagcatcatccccggtggattgccaattatcatttacatgaatccctgttacaa
gaaaacgaagaggaaaaactatcaaaagaggagcaagatatggcttgggaggtgtatcgc
aaatcgctggaatgggaagaagttcagagagtaccgattggtgagtctgtgcctgatcca
aagccagaagtgtcaaaggcagaagaagaacaacctgaagtagaaacttggcagctttca
actaagctgagaaatcgtttcacaaagcggcaatgcaccaaccttgcacatttgctgaca
cttagaagccagagaataaaaattgggggctatacagtctgcggggaatgtgcccgggtg
gtaaggtgggaagacttgaagaaataa
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