Medicago truncatula (barrel medic): 11411099
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Entry
11411099 CDS
T01716
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
11411099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11411099
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
11411099
Prokaryotic type
Archaeal type
TFB
11411099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
11411099
NCBI-ProteinID:
XP_003611972
UniProt:
G7KC98
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All DBs
Position
5:7574145..7578395
Genome browser
AA seq
487 aa
AA seq
DB search
MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP
PPTLNQTNTDTNEEEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGYLAELERTLESSS
TNSSSSVVVDNLRAYMQIIDVSSILGLESDISDHAFQLFRDCCSATCLRNRSVEALATAA
LVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
LQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVTSSLDSE
NLPEFKPNKANEAEGKSNARASQSTAIQQSTFWQSQLPSATQNHQNPNVLESMDIDGLQR
NHQQPEPMVEVANGAAIGSSVNSNQLYSPPASSSSSVMRSLSAPPSSAPPNIRHLQSSKT
MPGFPEY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccatactgttcagcggcgcaggggcgttgcaccacaacaaccaccggaaaa
tcaatcacagaatgcacatcatgcggccgcgtcgtagaagaacgacaatcccatccccac
cacatcttccacctgcgcgcccaagataatcccctatgcctcgtcacaccagatctccct
ccccccactctcaaccaaaccaacaccgataccaacgaagaagaagacccattcgagccc
acgggcttcataaccgctttctcaacatggtcattagagcccagcccgctctaccttcaa
tcttccctctctttttcgggctaccttgctgaacttgaacgaactcttgaatcatcttct
acgaattcttcgtcgagtgttgttgttgataatcttagggcttatatgcagattattgat
gtttcgtcgatacttggattggaatctgatatttctgatcatgcttttcagttgtttagg
gattgttgttctgctacttgtttgagaaatcggagtgttgaagctcttgctactgctgct
cttgttcaggctattcgagaagctcaagaacctcgaacccttcaggaaatttcaattgct
gccaatgtggcacaaaaggaaatcggtaaatacatcaagatactgggagaagctttgcag
ctaagccaacctattaacagcaattctatatcagttcatatgccaagattttgtactctt
cttcagctcaataaatctgctcaggaactggctactcatataggagacgttgtgatcaac
aaatgcttctgcactcgcaggaatccaattagcatctcagctgccgccatatatttggct
tgccaactagaagacaaacgcaaaacccaggctgaaatttgcaaagtaactggtcttact
gaagtcactctccgtaaagtgtacaaagaattactggagaattgggatgatttacttccc
tctaattacaccccagctgttcctccggagcgggcatttcccacgaccttaattgcttct
gggcgttcttcaacaactaaggttgatgctatagaggttacttcttctttagattcagaa
aatttgccggaatttaaaccaaacaaagctaatgaggccgaaggtaaaagtaatgctcgt
gcaagccaatccacagctattcaacagtcaacattttggcaatcccaacttcccagtgcg
acccagaatcatcaaaatccaaatgttttagaatcaatggatattgatgggctgcagcgc
aaccaccaacaacctgaacccatggtagaggtcgcaaatggtgctgctattggtagttct
gtaaactcaaaccaactttacagtcctcctgcgtcaagttcaagctctgttatgaggtcg
ctttcggctcctccttcatctgctcctccaaatattcgacacttgcaatcgtctaagaca
atgcctggttttccagagtactga
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integrated database retrieval system
