Medicago truncatula (barrel medic): 11411271
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Entry
11411271 CDS
T01716
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome
mtr04144
Endocytosis
mtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11411271
04142 Lysosome
11411271
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
11411271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11411271
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11411271
Membrane trafficking [BR:
mtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
11411271
Exosome [BR:
mtr04147
]
Exosomal proteins
Proteins found in most exosomes
11411271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
11411271
NCBI-ProteinID:
XP_003600924
UniProt:
G7JBT5
LinkDB
All DBs
Position
3:35332053..35345030
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAAANAPILMREALTLPSIGINPQHITFTHVTMESDKYICVRETAPQNSVVIVDMNMPN
QPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKAKMKSYQMPEQVVFWKW
ISPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPG
SPERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKVPGNENPSTLISFATKTVNAGQVI
SKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLE
LAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAEKREFDKILIYSKQVGYTPDYLFLLQSILRTDP
QGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHA
IEPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQF
RSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGVCDDELINVTNKNSLFKLQAR
YVVERMDADLWEKVLNPDNTYRRQLIDQVVSTALPESKSPEQVSASVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYVNRLDNFDGPQVGEVAVEAELY
EEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAI
ESFIRADDATQFLDVIRAAQDGNAYQDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAAR
KANSAKTWKEVCFACVDEEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTIMNHSPEAWDHMQFKDVIAKVANVELYYKAVHFYLQEHPDLINDVLNV
LALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESID
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSG
ERELAEELLVYFIDQGKKECFASCLFVCYDLIRVDVALELAWMHNMIDFAFPYLLQFIRE
YTGKVDELVKHKIESQNEVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGMGGGY
APPPPMGGGMGMPPMPPFGMPMGGY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccaacgctccgatcctcatgcgtgaagctctcactttgccaagcatt
gggattaatccacagcacataacattcacgcatgtgacgatggaatctgataagtatata
tgcgttcgagaaactgcgccgcagaatagcgtggttattgttgatatgaacatgccaaat
cagcctttgaggagacctattactgctgattctgctcttatgaatcctaattctagaatt
cttgctttgaaagctcaactccaaggaacaactcaagatcatttacaaatatttaatatt
gaacttaaagcaaagatgaaatcgtatcagatgcctgagcaggtagtcttttggaagtgg
attagccccaagttgttgggtcttgtgacacagacttctgtataccactggtcaattgaa
ggcgactctgaacctgtaaagatgtttgagagaacagcaaatctggcaaacaatcaaata
attaattatcgatgtgaccctaccgaaaaatggttggtcttgattggtattgctcctggt
tcccctgagaggccacaattggtgaaaggaaacatgcaactattctccgtggaacaacag
cgcagccaggctcttgaagctcatgcggcttcatttgctcaatttaaagttcctgggaat
gaaaatccgtctactttgatttcttttgccaccaagacagttaatgccggtcaagttata
tccaagttgcatgtcattgagctgggtgctcagccagggaaaccttcatttacaaagaaa
caagcagatctgttctttcctcctgattttgctgatgattttccagtttccatgcagata
tcccacaaatacagtttgatttatgtgattaccaaacttggtcttctatttgtctatgat
ttggagacggctactgctgtttataggaacagaatcagtccagatcctatatttttgacg
tcagaagctacatcagtgggaggcttttatgccattaacaggagaggccaggtgttactg
gctacggttaatgagcaaacaattgtgaattttgtcagtggtcaattaaacaatttggag
ctagcagttaatcttgccaagagaggaaatcttcctggtgctgagaagttggtagtagaa
cgtttccatgaactatttgctcaaacaaagtataaagaggcagctgagcttgctgctgag
tctccgcaaggaatccttcgtacacccgatacagttgccaaatttcagagtgttcctgtg
caagctgggcaaactcccccattgttgcagtattttggaactcttttaactagaggaaag
ctgaatgcctttgaatcactcgaactgtcacggcttgttgtgaatcagaacaaaaaaaat
ctgttggagaattggttggccgaggacaagcttgagtgcagtgaggagcttggagatctt
gttaagactgtggacaatgatcttgctttaaaaatatatatcaaagccagagctactcca
aaagttgttgctgctttcgctgagaaaagggagtttgacaagattctgatatactctaag
caggttggatatacacccgactatctcttcctcttgcaatcgatactccgtactgatcct
cagggtgctgttaattttgcattaatgatgtctcaaatggaaggtggttgtccagttgat
tacaacaccataactgatctgtttcttcagagaaacctgatccgtgaggcaactgccttt
ctcctagatgttttgaagccaaacctaccagaacacgggttccttcaaacaaaggtgtta
gagataaatcttgtgactttccccaatgttgctgatgcaattttggctaacggcatgttt
agccattatgaccgtcctcggattgcccaactttgtgaaaaagctggtctttatgtgcga
gcgttgcaacattacacagagttgccagatataaaacgtgtgattgtaaatacacatgca
attgagccacaggcacttgttgaattttttggcactctatcaaaagaatgggctttagag
tgtatgaaagatctattgctggtcaatcttagaggcaacctacagataattgtacaggtt
gctaaagaatactgtgaacaacttggcgttgatgcttgcataaagatttttgagcaattc
aggtcatatgaaggactgtattttttccttggttcatatttgagctccagtgaggatccc
gacattcactttaagtacatcgaggcagcagcaaagactggacaaatcaaagaggtcgag
cgtgtgactagagaatcaagtttctatgatcctgagaaaacaaagaactttctaatggaa
gctaagcttccagatgcacggccactaattaatgtttgtgaccggttcggatttgttcca
gatctaacacactatctatacacaagtaacatgcttcgctacattgagggttatgttcag
aaggtgaacccagggaatgctcctttagttgttgggcagctgcttgatgatgagtgtcca
gaagattttatcaaaggcttaattctctctgttcgttcattactgccagttgagcccctt
gtggctgaatgtgagaagaggaatcggcttcgtttgctcacacagtttttggaacatcta
gtaagtgaaggaagccaggatgtacatgttcataatgcactgggtaaaatcatcattgat
agtaacaacaacccagaacattttctcactacaaacccatactatgattctcgagttgtg
ggcaaatattgtgaaaagcgggatcccacgttggcagttgtggcttataggcgtggagta
tgtgatgatgaacttatcaacgtgacaaacaaaaactccttgttcaaactacaagcaaga
tatgttgttgagaggatggatgctgacctttgggagaaagttcttaaccctgataatacc
tacagaagacaacttattgatcaagttgtgtctaccgctcttcctgaaagcaagagccct
gaacaagtatctgcatcagtgaaggctttcatgactgctgatctacctcatgagttgatt
gagcttcttgagaagattgtgcttcagaattctgctttcagcgggaactttaatcttcag
aatcttcttattttgacagcaataaaggctgattcttccagagtaatggattatgtcaat
agactggataactttgatggtcctcaagttggagaagtggctgtcgaggctgagttatat
gaggaagcgtttgcaattttcaagaagtttaacttaaatgttcaagcagttaatgtcttg
ctagataatattcatagcatagatagagctgtggagtttgctttccgagttgaagaagat
gctgtttggagtcaggtggccaaggctcaacttagggaaggtctagttagtgatgcaatt
gagtcatttatacgagcagatgatgccacacaatttctggatgtcatccgagctgctcaa
gacggcaatgcttaccaggacttggtgaggtacttgctgatggtaaggcagaaaacaaaa
gaacccaaggtggacagtgagcttatttatgcctatgccaagattgataggctgagtgat
attgaggagttcattctaatgccaaatgtagccaatcttcaaaatgttggtgacagattg
tatgatgaagagctatacgaggctgcaaaaatcatatttgcttttatatctaactgggct
aaattagcagtcacacttgtgaagttgaaacagttccaaggcgctgttgatgcagcaagg
aaagctaacagtgcaaaaacatggaaggaagtttgctttgcatgtgttgatgaagaggag
ttccgtttggcccaaatatgtgggctgaacattatcattcaggtggatgacttggaagag
gtaagtgaatattaccaaaatagaggctgcttcaatgaattaatatccctcatggagagt
ggcctaggactagaaagggcacacatgggcatattcacggagctgggagttctgtatgct
agataccgtccggagaagcttatggagcatatcaaactatttgcaacccgactcaatatt
cctaaactcataagagcttgtgatgaacaacaacattggaaggaactgacctatttgtat
atccaatatgatgagtttgataatgctgcaacaaccatcatgaaccattcgcctgaagca
tgggatcacatgcaattcaaagacgttattgccaaagtcgctaatgttgagttgtattac
aaggctgttcacttctatttgcaagagcatccggatcttatcaatgatgttctgaatgtc
cttgcacttcgggttgaccatgcacgggttgttgatatcatgcgaaaggctggtcacctc
cgtctggtcaagccatacatggttgcagttcagagtaataatgtgtctgctgttaatgaa
gccttgaatgagatatatgtggaggaggaagactatgatagattgcgtgagtcaatcgat
ttgcatgataattttgatcaaataggccttgcacaaaagattgagaagcacgagcttctt
gagatgagacgtgttgctgcttatatttacaagaaggcaggtaggtggaagcagtccatt
gccttgtcaaagaaggacaacctttacaaagacgcaatggaaacagcatcacaatctggt
gaacgtgaacttgctgaggagttgctcgtttatttcattgaccagggaaagaaggaatgc
ttcgcctcgtgtctgtttgtttgctatgatttgatccgggtagatgttgctcttgaactg
gcttggatgcataatatgattgacttcgctttcccatatctcttacagtttatccgtgag
tacactggcaaagttgatgaacttgttaagcacaaaattgaatcccagaatgaagtgaag
gctaaagaacaagaagagaaggaagtaattgcacagcagaatatgtatgctcaattattg
ccacttgctttgcctgcaccaccaatgcctggaatgggaggaggaatgggaggaggctat
gcccctccccctccaatgggtggcggaatggggatgcctccaatgcctccttttggcatg
cccatgggcggctactga
DBGET
integrated database retrieval system