KEGG   Medicago truncatula (barrel medic): 11411271
Entry
11411271          CDS       T01716                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04142  Lysosome
mtr04144  Endocytosis
mtr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    11411271
   04142 Lysosome
    11411271
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    11411271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11411271
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11411271
Membrane trafficking [BR:mtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    11411271
Exosome [BR:mtr04147]
 Exosomal proteins
  Proteins found in most exosomes
   11411271
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 11411271
NCBI-ProteinID: XP_003600924
UniProt: G7JBT5
LinkDB
Position
3:35332053..35345030
AA seq 1705 aa
MAAAANAPILMREALTLPSIGINPQHITFTHVTMESDKYICVRETAPQNSVVIVDMNMPN
QPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKAKMKSYQMPEQVVFWKW
ISPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPG
SPERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKVPGNENPSTLISFATKTVNAGQVI
SKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLE
LAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAEKREFDKILIYSKQVGYTPDYLFLLQSILRTDP
QGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHA
IEPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQF
RSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGVCDDELINVTNKNSLFKLQAR
YVVERMDADLWEKVLNPDNTYRRQLIDQVVSTALPESKSPEQVSASVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYVNRLDNFDGPQVGEVAVEAELY
EEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAI
ESFIRADDATQFLDVIRAAQDGNAYQDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAAR
KANSAKTWKEVCFACVDEEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTIMNHSPEAWDHMQFKDVIAKVANVELYYKAVHFYLQEHPDLINDVLNV
LALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESID
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSG
ERELAEELLVYFIDQGKKECFASCLFVCYDLIRVDVALELAWMHNMIDFAFPYLLQFIRE
YTGKVDELVKHKIESQNEVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGMGGGY
APPPPMGGGMGMPPMPPFGMPMGGY
NT seq 5118 nt   +upstreamnt  +downstreamnt
atggcggccgccgccaacgctccgatcctcatgcgtgaagctctcactttgccaagcatt
gggattaatccacagcacataacattcacgcatgtgacgatggaatctgataagtatata
tgcgttcgagaaactgcgccgcagaatagcgtggttattgttgatatgaacatgccaaat
cagcctttgaggagacctattactgctgattctgctcttatgaatcctaattctagaatt
cttgctttgaaagctcaactccaaggaacaactcaagatcatttacaaatatttaatatt
gaacttaaagcaaagatgaaatcgtatcagatgcctgagcaggtagtcttttggaagtgg
attagccccaagttgttgggtcttgtgacacagacttctgtataccactggtcaattgaa
ggcgactctgaacctgtaaagatgtttgagagaacagcaaatctggcaaacaatcaaata
attaattatcgatgtgaccctaccgaaaaatggttggtcttgattggtattgctcctggt
tcccctgagaggccacaattggtgaaaggaaacatgcaactattctccgtggaacaacag
cgcagccaggctcttgaagctcatgcggcttcatttgctcaatttaaagttcctgggaat
gaaaatccgtctactttgatttcttttgccaccaagacagttaatgccggtcaagttata
tccaagttgcatgtcattgagctgggtgctcagccagggaaaccttcatttacaaagaaa
caagcagatctgttctttcctcctgattttgctgatgattttccagtttccatgcagata
tcccacaaatacagtttgatttatgtgattaccaaacttggtcttctatttgtctatgat
ttggagacggctactgctgtttataggaacagaatcagtccagatcctatatttttgacg
tcagaagctacatcagtgggaggcttttatgccattaacaggagaggccaggtgttactg
gctacggttaatgagcaaacaattgtgaattttgtcagtggtcaattaaacaatttggag
ctagcagttaatcttgccaagagaggaaatcttcctggtgctgagaagttggtagtagaa
cgtttccatgaactatttgctcaaacaaagtataaagaggcagctgagcttgctgctgag
tctccgcaaggaatccttcgtacacccgatacagttgccaaatttcagagtgttcctgtg
caagctgggcaaactcccccattgttgcagtattttggaactcttttaactagaggaaag
ctgaatgcctttgaatcactcgaactgtcacggcttgttgtgaatcagaacaaaaaaaat
ctgttggagaattggttggccgaggacaagcttgagtgcagtgaggagcttggagatctt
gttaagactgtggacaatgatcttgctttaaaaatatatatcaaagccagagctactcca
aaagttgttgctgctttcgctgagaaaagggagtttgacaagattctgatatactctaag
caggttggatatacacccgactatctcttcctcttgcaatcgatactccgtactgatcct
cagggtgctgttaattttgcattaatgatgtctcaaatggaaggtggttgtccagttgat
tacaacaccataactgatctgtttcttcagagaaacctgatccgtgaggcaactgccttt
ctcctagatgttttgaagccaaacctaccagaacacgggttccttcaaacaaaggtgtta
gagataaatcttgtgactttccccaatgttgctgatgcaattttggctaacggcatgttt
agccattatgaccgtcctcggattgcccaactttgtgaaaaagctggtctttatgtgcga
gcgttgcaacattacacagagttgccagatataaaacgtgtgattgtaaatacacatgca
attgagccacaggcacttgttgaattttttggcactctatcaaaagaatgggctttagag
tgtatgaaagatctattgctggtcaatcttagaggcaacctacagataattgtacaggtt
gctaaagaatactgtgaacaacttggcgttgatgcttgcataaagatttttgagcaattc
aggtcatatgaaggactgtattttttccttggttcatatttgagctccagtgaggatccc
gacattcactttaagtacatcgaggcagcagcaaagactggacaaatcaaagaggtcgag
cgtgtgactagagaatcaagtttctatgatcctgagaaaacaaagaactttctaatggaa
gctaagcttccagatgcacggccactaattaatgtttgtgaccggttcggatttgttcca
gatctaacacactatctatacacaagtaacatgcttcgctacattgagggttatgttcag
aaggtgaacccagggaatgctcctttagttgttgggcagctgcttgatgatgagtgtcca
gaagattttatcaaaggcttaattctctctgttcgttcattactgccagttgagcccctt
gtggctgaatgtgagaagaggaatcggcttcgtttgctcacacagtttttggaacatcta
gtaagtgaaggaagccaggatgtacatgttcataatgcactgggtaaaatcatcattgat
agtaacaacaacccagaacattttctcactacaaacccatactatgattctcgagttgtg
ggcaaatattgtgaaaagcgggatcccacgttggcagttgtggcttataggcgtggagta
tgtgatgatgaacttatcaacgtgacaaacaaaaactccttgttcaaactacaagcaaga
tatgttgttgagaggatggatgctgacctttgggagaaagttcttaaccctgataatacc
tacagaagacaacttattgatcaagttgtgtctaccgctcttcctgaaagcaagagccct
gaacaagtatctgcatcagtgaaggctttcatgactgctgatctacctcatgagttgatt
gagcttcttgagaagattgtgcttcagaattctgctttcagcgggaactttaatcttcag
aatcttcttattttgacagcaataaaggctgattcttccagagtaatggattatgtcaat
agactggataactttgatggtcctcaagttggagaagtggctgtcgaggctgagttatat
gaggaagcgtttgcaattttcaagaagtttaacttaaatgttcaagcagttaatgtcttg
ctagataatattcatagcatagatagagctgtggagtttgctttccgagttgaagaagat
gctgtttggagtcaggtggccaaggctcaacttagggaaggtctagttagtgatgcaatt
gagtcatttatacgagcagatgatgccacacaatttctggatgtcatccgagctgctcaa
gacggcaatgcttaccaggacttggtgaggtacttgctgatggtaaggcagaaaacaaaa
gaacccaaggtggacagtgagcttatttatgcctatgccaagattgataggctgagtgat
attgaggagttcattctaatgccaaatgtagccaatcttcaaaatgttggtgacagattg
tatgatgaagagctatacgaggctgcaaaaatcatatttgcttttatatctaactgggct
aaattagcagtcacacttgtgaagttgaaacagttccaaggcgctgttgatgcagcaagg
aaagctaacagtgcaaaaacatggaaggaagtttgctttgcatgtgttgatgaagaggag
ttccgtttggcccaaatatgtgggctgaacattatcattcaggtggatgacttggaagag
gtaagtgaatattaccaaaatagaggctgcttcaatgaattaatatccctcatggagagt
ggcctaggactagaaagggcacacatgggcatattcacggagctgggagttctgtatgct
agataccgtccggagaagcttatggagcatatcaaactatttgcaacccgactcaatatt
cctaaactcataagagcttgtgatgaacaacaacattggaaggaactgacctatttgtat
atccaatatgatgagtttgataatgctgcaacaaccatcatgaaccattcgcctgaagca
tgggatcacatgcaattcaaagacgttattgccaaagtcgctaatgttgagttgtattac
aaggctgttcacttctatttgcaagagcatccggatcttatcaatgatgttctgaatgtc
cttgcacttcgggttgaccatgcacgggttgttgatatcatgcgaaaggctggtcacctc
cgtctggtcaagccatacatggttgcagttcagagtaataatgtgtctgctgttaatgaa
gccttgaatgagatatatgtggaggaggaagactatgatagattgcgtgagtcaatcgat
ttgcatgataattttgatcaaataggccttgcacaaaagattgagaagcacgagcttctt
gagatgagacgtgttgctgcttatatttacaagaaggcaggtaggtggaagcagtccatt
gccttgtcaaagaaggacaacctttacaaagacgcaatggaaacagcatcacaatctggt
gaacgtgaacttgctgaggagttgctcgtttatttcattgaccagggaaagaaggaatgc
ttcgcctcgtgtctgtttgtttgctatgatttgatccgggtagatgttgctcttgaactg
gcttggatgcataatatgattgacttcgctttcccatatctcttacagtttatccgtgag
tacactggcaaagttgatgaacttgttaagcacaaaattgaatcccagaatgaagtgaag
gctaaagaacaagaagagaaggaagtaattgcacagcagaatatgtatgctcaattattg
ccacttgctttgcctgcaccaccaatgcctggaatgggaggaggaatgggaggaggctat
gcccctccccctccaatgggtggcggaatggggatgcctccaatgcctccttttggcatg
cccatgggcggctactga

DBGET integrated database retrieval system