Medicago truncatula (barrel medic): 11411297
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Entry
11411297 CDS
T01716
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11411297
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mtr04812
]
11411297
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
11411297
Microtubules and associated factors
gamma-tubulin ring complex
11411297
Cytoskeleton proteins [BR:
mtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
11411297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
NYD-SP28_assoc
NBCH_WD40
PAN2_N
Motif
Other DBs
NCBI-GeneID:
11411297
NCBI-ProteinID:
XP_003616512
UniProt:
G7K217
LinkDB
All DBs
Position
5:35994089..36002589
Genome browser
AA seq
796 aa
AA seq
DB search
MSLLATSGGDTVKLFDVSGKLFDSSSVKPGGDPCTLSFTPTSGFQVNSVKWNHTNLVVAS
AGDDKRISLWRKNGQSMGTIPVAGMDSVDNNEESILAISFSNKASRYVCSGGSGQVVKIW
DLQKKRCIKWLKGHTNTVTGVMYNCKDEHLASISLSGDLILHNLASGQRAAELKDPNQQM
LRVLDYSRVSRHLLTTAGDDGTVHLWDTTGRSPKVSWLKQHSAPTAGISFSPSNDKIIAS
VGLDKKLYTYDSGSRRPTSCISCEAPFSSLAFRDDGWMLAAGTSNGRVAFYDVRGKPQPF
GVLHAYGSSEAVTSLCWQRSKPVIVDERNCTAEIALVGDSVEDSILMPDPLPSATSSSIS
QSTSVSSTWNSGRLSTSIDTSSLATSSGGFITSLQNVSTGEETPLRNHLWPGGTLSRLHA
PRGSYNFKDDMEVFSPIVDVTPLTPSLWDENGVKKDSLFSDRKPMLFPSASRRFPSSEDV
SSDHSIADWKSGPTAKQDITQSSFPLVGLTPPASAKSEESSITPPEAWGGEKLPDKYTYT
RQPVNAPSRFGMLASSGQTAGSMISGLQDTFSSSGISSYTSSSLNFSNLRTKDVSTGQET
SLGFTDHLFSTSMPLSISTKTSLGQANIDSPKISDSPRMSSFSKRISSYAERIGTASSFG
DGASVGSPKIKKSGAETREELLNSLLLKSDVSIPTESGSLLLPNGTIPQQKASQSDAQGS
SFTLQLFQRTLNETLDSFQKSIHEDVRNVHLEILRQFHLQEMEMSTAMNSILENQAELLK
EVKSLRKENEQLRQLL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttggccaccagtggcggcgacaccgtcaaacttttcgacgtctccggcaag
ctttttgactcctcctccgtcaaacccggaggtgatccttgcactcttagcttcactcct
acttctggatttcaagtcaattcagtcaagtggaatcacacaaatttggttgttgcaagt
gctggtgatgataagaggatctctttgtggagaaagaatggacagagtatggggactatt
cctgttgctggtatggatagtgttgataacaatgaggagtcaatattggctatcagtttc
agtaacaaggcatccagatatgtgtgttctggaggaagcggccaagttgtaaagatatgg
gatttgcaaaagaagcgctgtattaaatggctaaagggtcatactaatactgtcacaggt
gtaatgtacaattgtaaagacgaacatttggcttctatcagcctcagtggggaccttata
cttcataaccttgcttctggtcaaagggctgctgaactcaaagatcccaatcaacagatg
ttgagagttctggattattctcgggttagtcgtcacctcctcacgacagctggtgatgat
ggaacggtacatttgtgggatacaactggacgcagccctaaggtttcatggctgaagcag
cattctgcaccaacggctggcattagcttctctccatccaacgacaagatcattgctagt
gttggccttgataaaaaattatacacttatgactctggatctagaagaccaacatcttgc
atttcttgcgaagctccgttttcttctttggccttcagagatgatggatggatgctggcc
gctggaactagcaatgggcgtgtggctttttatgatgtccgtggaaaaccacaacctttt
ggtgttcttcacgcttatggtagttcagaggctgttacaagcttatgttggcaaagatca
aaaccagttattgtcgatgaaaggaattgcactgctgagattgctcttgtgggagattct
gttgaagattcaatccttatgcccgaccctttaccttctgcaacttcatcaagcatttcc
caatctacatcagtgtctagtacttggaattctggtcggctgagtacttccattgacaca
tcttcgcttgcaacatccagcggtggatttataacaagcctacaaaatgtttctactgga
gaagaaacgccgctccgaaaccatttatggccaggtggaacattgtccaggttgcatgct
ccacgcggtagttataacttcaaggatgacatggaggtattctcccctattgtggatgtt
acaccattaacaccttcactgtgggatgaaaatggggtaaagaaggatagtttattttca
gataggaaacctatgttgtttccatcagccagtcgaagatttccaagttcagaagacgta
agcagtgaccattcaatagctgattggaagtctggcccaactgccaaacaggatatcact
cagtcttcatttccacttgtggggttaactccccctgcatctgcaaagagtgaagagtct
tccatcactcctccagaagcttggggtggagagaagttacctgataaatatacttacaca
cgtcagcctgtaaatgcaccatctcgctttgggatgttggcttccagtggtcagacagca
ggatcaatgatttctggattgcaagatacattctcatcatctggtatcagttcctatacc
agttcaagcctaaatttttccaatttacgcaccaaagatgtttctacaggccaggagact
tcattggggtttactgatcacttgttctctacttctatgcctttgtccatcagtacaaaa
accagccttggacaggcaaacatcgactccccgaaaatatctgattctcctagaatgtca
tccttttctaaaagaatttctagttacgcagaaagaataggcactgcatcttcctttggt
gatggagcttcagttggttcacctaagattaagaaatcaggagcagaaaccagagaagaa
cttctaaatagcttgctattgaagtcagatgtatctatcccaacagaatcaggctctcta
ctactcccaaatggaacaataccgcagcagaaagcatctcagtcagatgcacaaggatct
tcatttacgcttcagctttttcagcggaccctgaatgaaactctagattcctttcagaaa
tccatacacgaggatgtgagaaacgtccatcttgaaatattaagacagtttcatctgcaa
gagatggaaatgtcaaccgcaatgaactcaattctggaaaaccaagctgagttgctgaaa
gaggttaagtctctgcgtaaggaaaacgagcagcttagacaattgctttga
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