Medicago truncatula (barrel medic): 11411500
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Entry
11411500 CDS
T01716
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11411500
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
11411500
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
11411500
NCBI-ProteinID:
XP_003624969
UniProt:
G7KQP7
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Position
7:complement(41948103..41954500)
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AA seq
292 aa
AA seq
DB search
MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSF
TSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLTSLLFEVVAVALLKDPSTTLVTP
GPYGLIFASFVPFFFDIPVSTRFRICGFHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGIL
AGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGTPRTTSTRNVMGNVPSYPARQMERNY
PAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggcccatctggtttcacaaatgctcctgttacaagggctttcatcatcgct
tcagcgcttttcacaatcttctttgggatccagggtcgtttcaacactttgggcttgtct
tatcaggatatctttggaaagcttcgcatatggaagttgattatgtctgtattttccttc
acatcaacacccgagttgatgtttggattgtatctgctatattacttcagggtatttgag
agacaaattggttccaataaacactcggtgtttattgtgttctccatgttaacctcacta
ctatttgaagtagttgctgtagcacttttgaaagatccttcaacaaccctagtcactcct
ggaccttatggccttatatttgcttcatttgtaccctttttctttgacattcccgtttca
acacggttccgtatttgtggtttccacttctcagataagtcattcatatatctagctggt
cttcagcttctactgtcaaaatggaaaaggtccatgttaccagggatgtgtggcatcctt
gccggttccttataccgtttgaatgtcttctatatccgcaaagcaaagtttccggagttt
atttcatcattcttttcacgaatttccttgccatctatggggactccacgcacaacatca
acaaggaatgttatggggaatgtaccatcctacccagctcgccaaatggagagaaactat
ccggctccaacgcattctgcagtagaaccatcagaggactcaatcataacccttgtttca
atgggatttgacaggaattctgccagacaagccctagtgcaggccagaaatgacgtgaat
gtggcgacaaacatcctactggaggcacagtcccactaa
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