Medicago truncatula (barrel medic): 11411517
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Entry
11411517 CDS
T01716
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
11411517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11411517
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
11411517
Prokaryotic type
Archaeal type
TFB
11411517
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Motif
Other DBs
NCBI-GeneID:
11411517
NCBI-ProteinID:
XP_003625123
UniProt:
G7KSP1
LinkDB
All DBs
Position
7:complement(42876386..42881041)
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AA seq
313 aa
AA seq
DB search
MSDAFCSDCKRATEVVFDHSAGDAVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGASGDFLSSSLGRWQNRGSNPDRGLILAFKTIGTMAERLG
LVPTIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSIANGATK
KEIGRAKEYIVKQLGLENGGQSVEMGTIHAGDFMRRFCSNLGMNHQAVKAAQESVQKSEE
FDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNW
YAKEEDLKNLCSP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgttttgcagcgactgcaagcgagcgacggaggtggtgttcgaccactcc
gccggcgatgcagtctgttcggagtgtggtctcgtcttggaatctcactccatcgatgaa
acctccgagtggcgaaccttcgccaacgaatccggtgataacgatcccgttcgtgtcggt
ggtcccagtaaccctctccttaccgatggtggtctctccaccgtcattgctaagcctaac
ggtgcttccggtgattttctctcgtcttctctcggccgttggcagaatcgcggttctaat
cccgatcgtggattgatccttgcgttcaaaactattggtactatggctgaaaggttggga
ctggttccgaccatcaaggaccgagctaatgagatatataagcgggttgaagatcagaag
tctagcaggggaagaaatcaggacgcattattggctgcttgcctctacattgcttgtcga
caagaagacaagccacgcaccgtaaaggaaatttgctcaattgccaatggagccaccaag
aaggaaattggccgcgcaaaagaatacatagtgaaacaactgggtttggagaatggcggt
caatctgttgaaatgggaacaattcatgctggggactttatgagacgattttgttctaat
cttggtatgaatcatcaagctgttaaagctgctcaggaatctgttcagaaatccgaagaa
tttgatataaggagaagtcccatatcaattgctgcagcagttatatacatcattactcag
ctctcagatgataaaaaacctctcaaagatatatcagttgctacaggagttgcagaagga
accattaggaactcatacaaggatctctatccccatgtttcaaagataataccaaactgg
tatgcaaaggaagaggatctgaagaacctttgcagcccttga
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integrated database retrieval system
