Medicago truncatula (barrel medic): 11411658
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Entry
11411658 CDS
T01716
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11411658
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
11411658
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
NosD
Motif
Other DBs
NCBI-GeneID:
11411658
NCBI-ProteinID:
XP_003595563
UniProt:
G7IIV0
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Position
2:21730968..21734365
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AA seq
391 aa
AA seq
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MVHLKIHIIFLFLATFSILFETSNAASINVASFGAKSDGTQDSTKPFLSAWSLACKSNEA
STIYVPQGSFLLKQVSFWGPCLNKIDFKIDGTIVAPSKYESLGNSGYWILFMKVNWVSIY
GGTFDGKGAGYWRCRKAGRSCPAAARSISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVV
IKDVKIRAPSRSPNTDGINVQFSTGVTISHSTIMTGDDCISINQGTTHVWIDRIACGPGH
GISIGSLGSDSNEAGVENVTVTDSVFTKTQNGVRIKSWAKPNNGYARDINFRNLIMQNVY
YPIIIDQRYCTKTDCPHQNSGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDI
NLIYLKGSKTSSSCRNAGGSTLGLVIPKSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggttcatctaaaaattcacatcatctttctatttttagccacattcagcatcttgttt
gaaacttcaaatgctgcctctatcaatgtggctagctttggtgcaaaatctgatggcaca
caagactcaacaaaaccttttctaagtgcatggtctttagcatgcaaatcaaatgaagca
tccacaatttatgttcctcaaggaagtttcttgttaaaacaagtgagtttttggggtcct
tgtttgaacaagattgattttaaaattgatggtactatagttgcaccttcaaaatatgag
tcacttggtaattctggatattggatcttgtttatgaaagttaattgggtttcaatttat
ggtggaacttttgatggaaaaggtgctggttattggcggtgtagaaaagctggaaggagt
tgtcctgctgcagcaaggtctatatcattcagttggtccaaaaatgtattggttagtgga
ttaacatcattaaacagcaaggcaatacacattgcagtggaccattgcaaaaatgttgta
ataaaagatgtgaaaattagggctcctagtagaagtccaaacacagatggaataaatgtg
caattttcaactggagttactataagccattctactataatgactggtgatgattgtata
tccataaatcagggtacaactcatgtgtggattgatcgtattgcatgtggccctggtcat
ggcattagcattggaagtttgggcagcgattcaaatgaggcaggagttgagaacgtgaca
gtgactgattcagtgtttaccaaaacacaaaatggggttagaataaaatcatgggcaaaa
ccaaacaatggatatgcaagagatattaattttaggaatctcatcatgcaaaatgtctac
tatcccatcattatcgatcaaagatactgcaccaaaactgattgtcctcaccagaattct
ggggtgaagataagcagtgtatcatatcaacacataaagggaacttcagcaagtccagta
gctatcaaatttgattgcagtcaaagcaacccatgtttgggtctcaaattgcaagatata
aacctcatttatctaaaaggatctaaaacttcttcatcttgtagaaatgctggaggaagt
acccttggtttagtcattccaaaaagttgcctttga
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