Medicago truncatula (barrel medic): 11412066
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Entry
11412066 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
11412066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
11412066
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
11412066
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
11412066
NCBI-ProteinID:
XP_024637303
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Position
4:29844841..29848192
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AA seq
709 aa
AA seq
DB search
MLSITDTYAPEHKYTPWQFHFKDTSGLVALIHGYSKIHVRLVCIGTVRVSYCLIIERDWH
CWKIDMASEDSRFVRFEGDHLELAKLTSPNGDNGIKFNEKHVAPRVLSRVFSEDYKRVKR
RRRIFDPRGQTIHQWNKIFLVACLISLFVDPLFFYLPIVQDEVCIDIGIAVEVFLIIIRS
IADVFYVIHIFMRFHTAYVAPSSRVFGRGELVIDSSKIASRYLHKGFFLDFIAALPLPQV
LIWIVIPNLGGSTIANTKNVLRFIIIIQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAY
NLMLYMLASHVLGACWYLLSIERQEACWKSVCKLEESSCQFDFFDCNMVKDSLRVSWFVT
SNVTNLCSPNSLFYQFGIYGDAVTSKVTTSAFFNKYFFCLWWGLRNLSSLGQGLLTSTFV
GEIMFAIVIATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQ
SVRKYDQYKWIATRGVDEESLLRGLPLDLRRDIKRHLCLELVRRVPLFDAMDERMLDAIC
ERLKPALCTENTYLVREGDPVNEMLFIIRGNLDSYTTDGGRTGFFNSCRIGPGDFCGEEL
LTWALDPRPTMVIPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRNKLRFHSH
QWRTWAACFIQVAWRVRYKKRKVVVEMAVDVECDSYSLKCMQFKSKLVN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttatctataactgatacatatgcacctgaacacaagtataccccttggcagttccat
tttaaggacactagtggtttggtagctctgatacatggttactccaaaattcatgtccga
cttgtatgtatcggtaccgtacgcgtatcatattgtttgataattgagagagattggcac
tgctggaaaatcgacatggcttcagaagattcaagatttgttagatttgaaggtgatcat
cttgaattagctaaactaacatcacctaatggtgacaatggaatcaagttcaacgaaaaa
catgttgctcctagagtattatcaagagtgttctcggaagactacaagagagtgaaaaga
agaagaagaatatttgatcctaggggacaaaccattcaccaatggaacaagattttcttg
gtagcatgtttaatttctttgtttgtggatcctctcttcttttatttgccaatagttcaa
gatgaagtgtgcattgatattggaatagcagttgaagttttcctcataattattagatca
attgcggacgtcttttacgtcattcacattttcatgaggtttcatacggcatatgttgca
ccttcttctagggtttttgggagaggagaacttgttatagactcttctaagatagcatca
aggtacttgcataagggtttcttcttggactttattgctgccctgccccttcctcaggtg
ttaatttggattgtcatacctaatcttggaggctcaaccattgcaaacacaaaaaatgtc
cttaggttcatcatcattatccaatatttgccaaggctatttctcatttttccactttct
tcacaaattgtaaaagctacaggagttgtgacagaaacagcatgggcaggagctgcttat
aacttgatgctttacatgttggccagtcatgttttaggggcttgttggtatcttctatca
attgaaagacaagaagcatgctggaagagtgtttgcaaactggaggagtcatcttgtcaa
tttgattttttcgactgcaacatggttaaagattccctcagggtatcatggtttgtaaca
agtaatgtcacaaatttatgctcaccaaattctctcttttatcagtttggtatatatggt
gatgcagtgacatccaaagttacaacctctgcattctttaataagtacttcttttgtctc
tggtggggcctaaggaatctgagttctttgggacaaggtcttcttactagcacttttgtt
ggagaaataatgtttgccattgttattgcaacccttggattggttctttttgcattgctc
attggtaatatgcagacatacctacaatcgacaactgtccggttagaagagtggagagtc
aaaagaactgacacagaacaatggatgcatcacagacaactacctcaagaactaagacaa
tccgtgcgtaagtacgatcaatataaatggatagctacacgaggcgtagatgaagaatct
cttctcagaggacttccattggatcttcgaagagacattaaacgccacctttgtcttgaa
ctagttcgaagagttccactgtttgatgcaatggatgagaggatgctagacgcaatatgc
gaaagactaaagcctgcactatgcaccgagaatacttatctagttcgtgaaggcgatcct
gtgaacgagatgctattcataataagaggaaatcttgattcctacacaacggatggaggc
cgcactggtttcttcaactcatgtcgtattggcccaggtgatttttgtggcgaggagctt
ttgacatgggcgttggatccacgaccgactatggtaattccttcttcgactcgaacggtt
aaagccatatctgaagtagaagcctttgcacttatagcagaagacttgaagtttgttgca
tctcagtttagaaggttgcatagcaagcaattgaggaacaagttaaggtttcactcgcac
caatggagaacgtgggctgcttgttttatacaagttgcatggagagtacgatacaagaaa
agaaaggtagttgttgaaatggcagtcgatgttgagtgtgactcatattcactcaagtgt
atgcaatttaagagtaaacttgtaaattaa
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