Medicago truncatula (barrel medic): 11412177
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Entry
11412177 CDS
T01716
Name
(RefSeq) putative disease resistance protein RGA3
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
11412177
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
NB-ARC
LRR_RPS2
LRR_8
NACHT
LRR_4
AAA_16
WHD_DRP
nSTAND3
LRR_Zer-1
AAA_22
LRR_1
AAA
LRR_13
RuvB_N
Rx_N
Phage_T4_Y00H_G
Motif
Other DBs
NCBI-GeneID:
11412177
NCBI-ProteinID:
XP_003612713
UniProt:
G7K9L2
LinkDB
All DBs
Position
5:11777207..11782056
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AA seq
1245 aa
AA seq
DB search
MEVEIIFHSISNIQQLIKSSQEPLVNRLSGVDIDQLRNNLNEIDETVKKAQKSHFRSSEK
ILPWLKNVKVAIVEFNDLIEDINLKESIAGNISIFRWVLSLKSRYSVTRQVTKEQGKLKS
LSEDGKSLISVELEQAAAGSRRFSNEVFEKVTVVGREYEKKEIIDRLLKWIKSTDAFHVG
VFVIVGVSGIGKTKLARLVCKDEQVKANFGPQPIWIDLLYETFDVESIVKSATTTVNDGK
HPLIVLDGLQNEMKKDLENLQQRLKESCGTGCAILITTRGSHVANMVANNISGFAARFDL
GGFHEKEKKELVDQLLNLNNSTDDFHVGVFVIVGVPGIGKTKLARLVCEDEQVKANFGLQ
PIWIDLLHETFDVESIVKSATTTVDDGKHCLIVLDDLRNEIKNDLEKLQQRLKESCGTGC
AILITTRSNQVANNISGFAARFDLKGFDEKDSQSLFQQIHRSASASTSTNNKQDNGLEIV
KDCGGVPLAIKIKAALMNKILDEGGQIEDVEREFLNELKFRYYEDLPTCYKLCFAFCSLF
PEHHLIDAERLIQLWFAEGFITFSSISQQENGFNEFVASVFQQVEKENSEDQHGVVRECY
RMNRFMHKLTRLVASGENITVDSKGEKVEEGMLRASFDFGLDLSCGIPDSMFIAKKLRTI
LLPYKNINNPRLPHEVKMTTPTCDKIFNTFKSMHVLDLHDLGIKIVPTSIEEMKYLRFLD
LSHNNIEKLPSCITKLIHLQTLKLSYCHVLKELPKDLKDLTRLSHLNIEGCLDLTHMPTG
IDKLTSLQTLSLFVASKKHADTGGLRELTNLNNLKDKLEILHLEQVKFSPSNEAAKDEFV
KNKQHIQHLTLRWDRDDDEEGSSGSGGADVDNNDEKLLECLQPPPNLKVLFIVGYNGRTL
SKWLDSLQCLVKFTLSDCPKCKFLPPIDHLPNLKALHLRRLESLEFIAEKSSEPKVDSSS
SKQEFFPALKELTISDCPKLESWWENDKTLKKNRPSFPCISKLNIRCCPKLACVPLCTNL
DEELVLVDSNVRSMRETKTETETTVEASLSPLLNLKFMVIERIEESPPQNWLEGFTSLKE
LHIRDCPNLKSLPQGFKTLCSLQSLCIERCQEFHLEKPEVDYWEGLVKLESLTLRSIPKL
VTLTRGFGNLKSLKDLRIYDCPSLTHLPETIDNLTSLRELVLSECRSMDSLPKGMIKLTS
LFTLIIMDCPLLLPRCQPETGDDWPQIAQIKHKSVKETPQDLGDL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaaattatattccattcaatctccaacatccaacaattaattaagagctcc
caagaacccctagtaaatcggttatcaggagttgacatcgaccaacttaggaacaacctt
aacgagatcgatgaaacagtaaaaaaagcacaaaaaagtcacttccgtagctctgaaaag
attcttccttggttgaaaaatgttaaagtagcgatagtcgagtttaacgatttgatagaa
gatatcaatctcaaggagagtattgctggcaatatttcgattttcagatgggtgttaagc
ttaaagagtcgttatagtgttacgcgtcaagtcacaaaagagcaagggaaactcaaaagc
ttaagtgaggatggaaagagtttaatctctgtagaattagaacaagcagcagcaggtagc
agaaggttttcaaacgaagtgtttgagaaagttactgtggttggaagagaatatgagaag
aaagagattatagatcgactacttaagtggatcaaatctactgatgcttttcatgttggt
gtttttgtcattgttggtgtttcaggaataggaaagacaaaacttgcacgtcttgtttgc
aaggatgagcaagtcaaagcaaattttgggccacagccaatttggatcgatcttctctac
gagacctttgatgttgaatcaatagttaagtcagctaccaccactgttaatgatggtaaa
caccctctaattgtgcttgatggtttgcaaaatgagatgaagaaggatcttgagaatttg
cagcaacgattaaaggagtcttgtggtaccggttgtgcaatactcatcactacacgtggc
agccatgttgctaacatggttgctaacaacatttctggatttgctgctagatttgatttg
ggagggtttcatgaaaaagagaagaaagagcttgtagatcaactacttaacttgaacaat
tctactgatgattttcatgttggtgtttttgtcattgttggtgttccgggaatagggaag
acaaaacttgcacggcttgtttgcgaggatgagcaagtcaaagcaaattttgggctacaa
ccaatttggatcgatcttctacacgagacctttgatgtggaatccatagttaagtcagct
accaccactgttgatgatggtaaacactgcctaatcgtgcttgatgatttgagaaatgag
attaagaatgatctcgagaagttgcagcaacgattaaaggagtcttgtggtaccggttgt
gcaatactcatcactacacgtagcaaccaagttgctaacaacatttctggatttgctgct
agatttgatttgaaagggtttgatgaaaaagattctcaatcgttgtttcaacaaattcat
agatcagcttcagcttcaacttcaaccaacaacaaacaagacaacggattggagattgtg
aaggattgtgggggagtgcctcttgcgataaagatcaaagcggcgttgatgaacaagatt
cttgatgaaggaggacaaatagaagacgtggagagggagtttctaaacgagctcaagttt
agatattacgaggatcttcccacatgttataaattgtgctttgcattttgttcattgttt
ccagaacatcatttgattgatgccgagagattaattcaactttggtttgctgaaggattt
atcacgttttcctccattagtcaacaagaaaatggtttcaacgaatttgttgcctcggtt
ttccaacaagtggagaaagaaaacagcgaagaccaacacggtgttgtgagggagtgctat
agaatgaacaggttcatgcataaactcacaaggttagtggctagtggcgaaaacatcact
gtagattcaaagggagaaaaagttgaagaaggaatgctgcgagcttcgtttgattttggt
ttggatctttcgtgtgggattccagattcgatgtttatagcaaagaaactgaggaccatt
ttattgccatacaaaaacattaacaaccctcggcttccacacgaggtgaagatgacgacg
ccaacctgtgataagatcttcaacaccttcaagtccatgcacgtgttggatctacatgac
ttggggatcaagattgtaccaacctctattgaggagatgaaatacttgaggtttctagat
ctatcccacaacaacatagagaagcttcctagttgcatcacaaagcttatccatttgcaa
accttgaaactctcctactgtcatgtcctcaaggaattgccaaaagacttgaaggatctg
actcgcctcagccatcttaacattgagggttgcttggatctaactcacatgccaaccggg
atagataaactcacttccttacaaacattgtcacttttcgtggccagcaagaaacatgct
gacaccggaggactaagggaactcacaaatctcaacaacctcaaggacaaactggaaatt
ttgcatctggagcaagtcaagttctctccatccaacgaagcggctaaagatgaatttgtg
aaaaataaacaacacattcagcatttgactctaagatgggaccgcgatgatgatgaagag
ggaagcagtggcagcggtggcgctgatgtagacaacaacgacgagaagttacttgaatgt
ctccaaccacctcccaatttgaaagttctattcattgtagggtacaatggccgcacctta
tctaaatggctcgattcgcttcaatgccttgttaagtttaccttgagtgactgtcctaaa
tgcaaatttctaccgccaatcgatcaccttccaaatctcaaggctctccatcttcggagg
ttggaatctcttgaattcattgcagaaaagagcagtgaacctaaagtagattcctcttcc
tctaaacaagaattctttccagccttgaaggagcttacaatttcggattgtcctaaactc
gaaagttggtgggaaaatgataagacattgaaaaaaaacagaccatctttcccttgcatt
tcaaaactaaatatccgatgttgtcctaaattagcatgcgtgccactgtgtactaatctc
gatgaagagttggttctggtagattccaatgtaagatcaatgagggaaaccaaaactgaa
accgaaactaccgtagaagcttcactaagtcctctcttgaatttgaagttcatggtaatc
gagcgtattgaagaatctccaccacagaattggcttgaaggcttcacttcccttaaagaa
cttcacattcgagattgtcctaacttaaagtcattaccacaaggtttcaagactctctgt
tcactacagtctctctgtattgagagatgtcaggagttccacctcgaaaaacctgaagtc
gattattgggagggtcttgtaaagcttgagtctcttactttaaggagtattccaaaacta
gtgacccttacacgcggatttggaaacttgaaatcattgaaagatttaaggatttatgat
tgccctagtttaactcatttaccagaaaccatagacaatctcacttcacttcgtgaactg
gttctttctgaatgcagaagtatggattctctgcccaaaggaatgataaagctcacgtca
ctatttaccttgatcattatggactgccccttgttattgccaaggtgtcaacctgaaacg
ggtgatgattggccacaaattgctcaaatcaaacataagtcagtgaaggagactcctcaa
gacttaggggacctgtga
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integrated database retrieval system
