Medicago truncatula (barrel medic): 11412335
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Entry
11412335 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC11412335
KO
K14827
pre-rRNA-processing protein IPI1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
11412335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11412335
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
11412335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
AF1548-like_C
INTS1_R4
HTH_61
Motif
Other DBs
NCBI-GeneID:
11412335
NCBI-ProteinID:
XP_039690542
LinkDB
All DBs
Position
5:11393444..11404155
Genome browser
AA seq
907 aa
AA seq
DB search
MVMEETNNHMQLIEEEDMIMEEESIDKLISQDIDADDVKKLLDAGIFTCNSLLLQAKKNL
TRINDLSEETVDKIWEAAEKHLRKSVVGIATGSQMPDELLESNITALRRHLKLISWPPHP
NKIDELRAIESLFQKSPAELKPYSYILVETLRGLVNNEDGQLRNLAYDVFELVFPYLDVE
DQQMLTRRMMGSILNAMQHSKLDIQSTSFEFLNHILWLNPTLLLSDAKKIFQNYKDFFGK
ILYFNKDQKTNLKVSLPGLIRCLSHLVKNDVENDLLDKGDIGERLLHAYEDDSFMSFNGL
SRNMKDLIPLLVDSFQRLIPSATEWLDEPTFGCLTSILHCIDLIVIYLKKTKDLNSQSGP
EVAASLENLFHHFPIHLVTNFLDKGSNDKFLELNFFISKIFLELKEWIFLNSLLEKCLEF
VESALLGKFCQVSESANTVWERHLSQLIPFVSKLILHGANNNSNRASRLLPAFTHIFTVS
MPGSLLKWTCLHAIKDMLSHIHESFPFQEKSECVKALDAWMLELTELLLKIGYNPTDYSL
LVIQVLHGMGKVAVKDSLLRHSYDNIQYQLHDFFCILQEEGEPILYGPFLFLPKDTQELF
LCCVEYFSWLDTPILDSLLCFCITLDIDPDMLFRIIEVLNSFNTATQMRIEDYVNFFITL
VSKLNVYYGVVYIDLKNDAPQQTLKKLIDVICSNMTQKKGDNYLLVEKKTIKEILRKRSF
HNAACLLRILVTMDSEPPSRLSGESIISLSYYVSEFLMQAVKRVREDEYEKYIHYDQIFP
GFYFLEPCFSLFSQCPELLSNALKAMASTITYDALKTMTSGIGFYLVSEDDRKEMRNCLT
RANVITSVIVLMSKDIRLKSMSVFKNEINYIIDEVHLLQSSQQVISFTDEERHAIQFILD
QLRNISE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggttatggaagagacgaacaatcacatgcagcttattgaagaagaagacatgattatg
gaagaggaatctatcgacaaattgatttctcaagatattgacgccgacgatgtgaagaag
cttctggatgcagggatctttacctgcaatagcttattgttacaagcaaagaagaacttg
actcgaatcaacgatctatctgaggaaacggttgataagatctgggaagcggctgaaaag
catctgagaaaatctgtggttggaattgcaaccggaagccaaatgcctgatgaactgtta
gaatcgaatattacagctttaagacgccatctaaagctaatctcttggcctccacaccct
aataaaatagatgagttgcgtgctattgaaagtttattccaaaaaagtccagcagaactt
aaaccgtacagttatattcttgtggaaacactccgggggcttgtgaataatgaagatgga
cagcttcgaaacttagcttatgatgtttttgaactggtctttccatatcttgatgtggag
gatcaacaaatgctcacccggaggatgatgggatcaattttgaatgcaatgcaacattca
aagttagatattcaaagcacatcatttgaatttttaaaccatattctttggctgaacccc
accttattgctttctgatgcaaaaaagattttccagaactataaagatttttttgggaag
atcttgtacttcaataaggatcaaaaaacgaatctaaaggtttctctgcctggattaatc
agatgcttgtcacatcttgttaagaatgatgtagaaaatgatttgcttgacaagggggat
attggagagaggctattgcatgcttatgaagatgatagctttatgagctttaatggttta
tctcgtaacatgaaggatttaatcccattattagttgatagttttcaacgattgattcca
tcagcgacagaatggcttgatgagccgacttttggatgtttgacatctattcttcactgc
attgatttaattgtcatatacttgaagaagacaaaagatttaaattctcaaagtggacca
gaagtggctgcatccttggagaacctatttcatcactttcccattcatctagtcactaat
tttctagataagggaagtaatgataaatttcttgagcttaacttttttatttcaaaaata
tttttggaattaaaggaatggattttccttaattcattgttggagaagtgtctagaattt
gttgaaagcgcattacttggaaagttctgccaggtttctgagtctgctaatactgtatgg
gaaagacatttatcgcagcttatcccttttgtttctaaacttattttacatggagcaaac
aacaacagcaatagggcatctcgtctactaccggcatttacacatattttcacagtaagc
atgcccggttccttgttgaaatggacatgtcttcatgctattaaagacatgctctcgcat
attcatgagagctttccttttcaagaaaagtcagagtgtgtaaaagctttagatgcatgg
atgttggagcttactgagttgctgttgaaaattggatataatccaaccgactactctttg
cttgtcatacaagtcctgcatggcatgggaaaagtggctgtgaaagattcattgcttcga
cactcgtatgacaatatacagtaccaactccatgatttcttttgcatacttcaagaagaa
ggagagcctattctctatggtccttttctttttcttccaaaagatactcaggagctattt
ttatgctgtgtggagtatttttcttggttagacacaccaattttggattctcttctatgc
ttttgcataactcttgatatagatcctgatatgctctttcggatcatagaagtgttgaat
tcttttaatacagctactcaaatgagaattgaagattacgtgaatttcttcataactttg
gtctccaagctcaatgtttattatggagttgtttacattgatttgaagaatgatgcaccc
caacaaactttgaagaagctgattgatgttatttgttctaacatgacacagaagaaggga
gacaattatcttcttgtagagaaaaagacaatcaaggagatattgcgaaagcgttctttt
cataatgctgcatgtctgctaaggatccttgttacaatggattctgagccgccttctaga
ctttctggtgaaagtattatctctctaagctattacgtttctgagtttctgatgcaagct
gtgaagcgcgttcgagaagacgagtatgagaagtacattcactatgatcaaatatttcct
ggattttattttttggaaccttgcttttcattgtttagtcaatgccctgagcttctaagt
aatgctttgaaagcaatggcatcaactataacctatgatgcattgaagacaatgacatca
ggcataggtttctacttggtatctgaagatgaccgtaaagagatgaggaattgtttgact
agggcaaatgtgattacatctgtaattgtgttgatgagcaaagacataagattaaaatct
atgtctgtcttcaaaaatgaaatcaattacatcatagatgaagttcatctcttgcagtca
tctcagcaggttattagtttcacagatgaggaaaggcatgcaatacaatttatattggat
caactcagaaatatatctgagtag
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