Medicago truncatula (barrel medic): 11412788
Help
Entry
11412788 CDS
T01716
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11412788
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
11412788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
ASH2L-like_WH
PHD_2
Motif
Other DBs
NCBI-GeneID:
11412788
NCBI-ProteinID:
XP_003613773
UniProt:
G7KF85
LinkDB
All DBs
Position
5:complement(17813087..17817371)
Genome browser
AA seq
666 aa
AA seq
DB search
MLNIDVVGNKRRKRCGRVFRFKNFGEQGYPLMFNGASFRENVNGLLEYANLESNLKMGMP
MWSFQLELNHHPPLYILLFVIEESIEAALNRHCNHCQYVGWGNHFICNKKYHFLLPSKET
LSSCTSCENCCDSNGTMNISGKSNKLIELEGHMMHGVFHSNGFGHLLCVNGLETGSNLGG
NQIMEFWNRLCNGLQARKVSLNDTSQKRGMELRLVNGIAYSEPWFGRWGYKFGRGCFGVT
QSMYQKAIEAIRSMPLYLLTHHIANSNHEIPLIFQRYQTLSDHSLVTLGDLFHYMLELKS
RLPRETCIGSFNTSALVETNCRWSPKRIEMATRVIVEALKRTEFRWISRQEVRDAARAYI
GDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVLEYCLEDISNVYPCHEGLVMSSSSSNK
VKDKYKITRGQLMKDMICLYKYILIDTKPIIGSEFLSAIPLAARIILDTKHLIKDYGEVP
LQVELGSKEKCNLYCTILLRNVNNVGHNHEYYLNKDIPMPPYECITLKSCATINDLKLEV
ERNFREIYWGLRSFVVQPNGNLMNAKGNEMVFGMIEVGGKLVLEGWHGDEMGINMVDQIC
ERDPKKGIVECICGTKENDGERMVSCDICEIWQHTRCVRIPNDEEVPHIFLCKRCEQEIV
IFPSLP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatattgatgtagttggaaacaagagaaggaagagatgtgggagggtttttagg
ttcaagaattttggggaacaagggtacccattaatgtttaatggagcatcatttcgtgag
aatgtgaatggtttacttgaatatgcaaatttggaaagtaatttaaaaatgggaatgcct
atgtggtcatttcaacttgaattgaatcatcatccacctttgtatattttgttgtttgtg
attgaagaatcaattgaggcagcattgaatcgtcattgcaatcattgtcaatatgttggc
tggggaaaccatttcatttgcaataagaagtatcatttcctattaccttcaaaggagaca
ctaagtagctgcacaagctgtgaaaactgctgtgattcaaatggtacaatgaatattagt
ggtaagtccaacaaattaatagaattagagggacatatgatgcatggtgtatttcactct
aatggatttgggcatttgctatgtgtcaatggattggaaactggttccaatttgggtggt
aaccaaatcatggagttttggaatcgtttgtgcaatggattacaagcaaggaaagtgagt
ttgaatgacacatcacaaaaaagaggcatggaactaagacttgtgaatggaatagcatac
agtgagccctggtttggtcgttggggatacaaatttggtcgaggatgttttggtgtaaca
caatcaatgtaccagaaagccatagaagcaataagaagcatgccactatacttactcaca
catcacattgcaaattccaatcatgaaatcccattaatcttccaaaggtaccaaacactt
tctgatcactctcttgtcacccttggtgacttatttcactacatgttagagctcaagtcg
cggcttccccgtgaaacatgcattggttccttcaacacaagcgccttagtcgaaacaaat
tgtcgttggtcccctaaaaggattgaaatggcaacacgggtcattgtcgaggccttaaaa
agaactgaattcaggtggatttcaagacaagaagtgagagatgccgcgcgtgcttatatt
ggagacactggtttgttggattttgttttgaagtcgctaggaaaccacgttgttggaaac
tatttggttcgtcgaagcttgaatccggttacaaaagtgttggagtattgtttagaagac
atttctaatgtttacccttgtcatgaagggttggttatgagtagtagtagtagtaataaa
gttaaggacaagtacaagatcacaagggggcaacttatgaaggacatgatttgtttgtat
aagtatatacttattgacacaaaaccaattatagggtcagaatttctttcagctatacca
ttggcagctaggataattcttgacactaaacatcttatcaaagactatggagaggttcct
ttgcaagttgagttaggatcaaaagaaaaatgcaatctttattgtacaattttgttaagg
aatgttaacaatgtaggccataatcatgagtattatttgaacaaggatattccaatgcca
ccttatgaatgtatcacattaaaaagttgtgctacaattaatgacttaaagctagaagtt
gaaaggaattttagggaaatctattgggggttaaggagttttgtggtgcaaccaaatggg
aatttgatgaatgcaaaagggaatgaaatggtttttgggatgattgaagtgggtggaaaa
cttgtacttgaaggttggcatggtgatgaaatgggaatcaatatggttgatcaaatatgt
gaaagggatccaaagaagggaattgtggagtgcatttgtggaactaaagaaaatgatggt
gagagaatggtgtcttgtgatatttgtgaaatttggcaacatactagatgtgttagaatt
ccaaatgatgaagaagttcctcatatttttctatgcaaaaggtgtgagcaagaaattgtt
attttcccttctttgccataa
DBGET
integrated database retrieval system
