Medicago truncatula (barrel medic): 11412938
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Entry
11412938 CDS
T01716
Name
(RefSeq) SWR1-complex protein 4 isoform X1
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11412938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11412938
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
11412938
NuA4 complex
11412938
Chromatin remodeling factors
SRCAP complex
11412938
SWR1 complex
11412938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PRC2_HTH_1
T3RM_EcoP15I_C
Motif
Other DBs
NCBI-GeneID:
11412938
NCBI-ProteinID:
XP_024639129
LinkDB
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Position
1:complement(42539800..42549057)
Genome browser
AA seq
423 aa
AA seq
DB search
MDVKNILGGLPNFSFPLQEKNSSEVCALTGGFAPLMPAVDLSLLKKKPPSDKKVIWRWLP
FKNSARKDDLQLHHWQIQVVNGVPPTGDYSFAKYNKSVDITRYTDEEYEKYLANPKWTKE
ETDQLFDLCERFNLRFIVIADRFPSSRTVEELKDRYYSVSRAMLIARNPSSTDVAMDPLV
QEPYNVSQEMERKRAQSLILSQTKQQERRDEEVLAEAKRIAELRIMTKVDLESELDVASK
ACANVTERANPGETVSPSNTELPPIVVSSMTSTDNASTIASLRMLYVYSRTYALGQMVQS
ASSSAGLRTIKRVDQTLQELGVNLKPRVPTKTVCAEHLELRNEILTLLNLQKQLQNKEVE
GSSFRDGSHCETTGTPKRLHRGGDQDLTFVPDNTSSGGERIGKRDQKRKKLHHHQPIQKD
KKN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaaaatatcctcggaggattgcccaatttttccttcccacttcaagagaag
aattctagcgaggtgtgtgcacttactggtggatttgcacctcttatgccagcagttgat
ttgtctctgttgaaaaaaaagcctccttcagacaaaaaggtcatttggcgatggcttcct
ttcaaaaattctgctcgtaaagatgatcttcagcttcaccattggcagattcaagttgta
aatggtgttccaccaacaggggactattcttttgccaagtataacaagtctgttgacata
acaagatacacggacgaggagtatgagaaatatttggcaaatcctaaatggaccaaggag
gaaacagatcaactgtttgacttgtgtgagaggtttaatctccgatttattgttatagct
gataggttcccttcatctcgaactgttgaagaattgaaggatcgatattatagtgtatcc
cgggctatgttaattgccaggaatccatcttctacggatgttgcaatggatccacttgtt
caggaaccatataacgtttcacaggagatggaacggaaacgagctcagtctctgatcctt
tctcaaacaaagcaacaagagcgaagagatgaagaggtgcttgccgaagcaaaaagaatt
gctgaattacgcataatgaccaaggttgacctagagtctgagttggatgttgcttcaaag
gcttgtgcaaacgttacagagagggccaaccccggtgaaactgtatctccatcaaataca
gaacttccaccaatagttgtttcttccatgacatcgacagataatgcatctaccatagcc
tctcttcgcatgctttatgtctattcaagaacctatgcacttggacaaatggtgcaatct
gcaagctcatcagctggacttcggactatcaaacgtgttgatcaaactttgcaggaactt
ggggtcaatttgaaaccaagggttccaacaaaaactgtttgtgcagagcatctagaacta
agaaatgaaatactaaccttgctaaatcttcagaaacagctgcaaaataaggaggttgaa
ggttcatcttttcgtgacgggtcacactgcgaaacaacgggaacaccaaagcgtttgcat
cgaggcggagatcaggatctgacatttgttccagataacacaagttctgggggggaaaga
attggtaaaagggatcaaaagcgcaagaaacttcatcatcaccagcccattcaaaaagac
aaaaaaaactaa
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