Medicago truncatula (barrel medic): 11412947
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Entry
11412947 CDS
T01716
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11412947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11412947
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
11412947
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Ortholog
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GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
11412947
NCBI-ProteinID:
XP_003606678
UniProt:
G7JUU5
LinkDB
All DBs
Position
4:32103189..32106376
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AA seq
389 aa
AA seq
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MNSHEDQKNEDLHEDPLNEDSSELQQSEDEDMLSEDSHEDEADEDEDDDQYEDQLSEASN
EVSSESEWNQDLSEDHNDDIHEYQWNIRHNEIFEHVYSCFSVSSLNRPILENGDKIIMPS
SALDRLARLNIEYPMLFELRNTSAERTTHCGVLEFTADEGIVFLPNWMMEDMLLQEGDLV
SLKSTSLEKGKFVKFQPHSKDFLDISNPKAMLETSLRSYSCLTTGRTIMIPYNNKKYYID
VVETKPSPAISIIEIDCEVDFAPPLDYKEPEKPLPSDLSHKKHRQVEEEPPTKVPKLIPF
SGSGRRLDGKPSAQSIEQTSTPIIKQQQTENKTNSSIRTPGKLVFGSNANASNVQTQPKA
SLKSASQESSKKTDTPQFQAFLGKKYSLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacatgaggatcagaagaatgaggatttgcatgaggatccgttgaatgaagat
tcatcggagcttcagcagagtgaggatgaggatatgttaagtgaagattcacatgaggat
gaagcggatgaggacgaggatgatgatcaatatgaggatcagttgagtgaagcttcaaat
gaggtttcatctgagagtgagtggaatcaggatttgtctgaggatcataatgatgatatt
catgagtatcagtggaatatacgacacaatgagatctttgaacatgtttacagttgtttc
tctgtctcatctctgaataggccaattctggaaaatggtgataaaattatcatgccctct
tcagctctagatcgccttgcacgtttgaacatagaatatccaatgttatttgaactgaga
aatacttctgctgaaagaactactcactgtggagtcttggaattcactgctgatgagggg
attgtattcttaccaaattggatgatggaagatatgctcctacaggaaggagaccttgtc
tctctgaaaagcacaagtcttgaaaaaggaaagtttgtgaagttccagcctcacagcaaa
gattttttggatatctccaatccaaaagccatgttagaaacttcattgaggagttactca
tgtttaacaactggccgcactataatgattccatataacaataaaaaatattacattgat
gtggttgaaacgaaaccttctcccgcaatcagtataattgaaatagactgtgaagttgat
tttgctccacctcttgattacaaagaacctgagaagcctttgccatctgatttgtctcat
aagaaacatcgacaagttgaagaagagccaccaactaaggttcccaaactaattccgttt
agtggttctggaaggcgtttggatggtaaaccgtcggcacaatcaatcgaacaaacttct
actccaattataaagcagcaacaaactgaaaataaaaccaacagttcgattagaactcct
gggaagcttgtttttgggtcaaatgccaatgcatccaatgttcaaacacagccaaaggct
tctttgaagagtgcaagtcaagagtcatctaagaaaacagataccccgcagttccaagct
ttcttggggaagaagtattcattaagatga
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