Medicago truncatula (barrel medic): 11413082
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Entry
11413082 CDS
T01716
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11413082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11413082
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
11413082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF7744
Motif
Other DBs
NCBI-GeneID:
11413082
NCBI-ProteinID:
XP_003589519
UniProt:
G7I7R8
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All DBs
Position
1:complement(8261687..8271601)
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AA seq
791 aa
AA seq
DB search
MIAKDFNDEEKWLAEGIASIQHNAFFMHRALDDNNLRDSLKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRRLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKD
TPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSDYEDRDYGSVKDAVEFV
LENFSEMNKLWVRLQHQGAGRVKEKKDKERNELRDLVGKNLHVLSQIDGVDLEVYKDTVL
PSILEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLM
DRLSNYAASSTEVLPEFLQVEAFTKLSTAISRVIEAQVDMPIVGAIALHVSLLTFTLRVH
PDRLDYVDQVLGSCVNKLSGKPKLDDNRATKQVVALLSAPLDKYNDVVTALTLSNYPRVM
DHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELIKGLIIDLDGTSEDEIDEEDFS
EEQNSVARLINMLHNNDPEEMFKIICTVRKHIMIGGPRRLPFTVPSLIFSALKLIRQLQG
QGGDIAGEEEPATPRKIFQLLNETIEVLSSVSSSELALRLYLHCAEAANDCDLEPVAYEF
FTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMSIFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEIL
NKYIYYFEKGNPQITSAAIQGLIELIKTEMQSDSASALPASDPFFASTLRYIQFQKQKGG
ILGEKYDSIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgaaagacttcaacgacgaagaaaaatggctcgcagaaggaatcgcttctatt
caacacaacgctttcttcatgcatcgcgctcttgatgataacaatctcagagattcactc
aaatactcagcgcagatgttatctgaacttcgaacttctagactctctcctcataaatat
tatgaactgtatatgagagcttttgatgagttacggaggttggagatgttctttaaagat
gaaagtagacatggtgtttcgattgttgatttgtatgagcttgttcaacatgccgggaat
atattgcctagattgtatcttctttgcacggttggatccgtttaccttagatgcaaggat
actcctgtaagggacgttcttaaagacctagtggaaatgtgtcgcggtgttcagcatccg
attcgtggtctgtttttgaggagttatctttctcaagtcagtagagacaagttgcctgat
attggctctgattacgaggatagggattatggcagtgtaaaggatgcagttgaatttgtt
ctagagaatttctcagaaatgaataagctctgggttcgattgcaacatcagggagccggt
cgggtaaaagagaagaaagataaagaaaggaacgagcttcgcgatcttgtcgggaaaaac
ctccacgttctgagtcagatagatggtgtagaccttgaggtgtacaaagacaccgtcctt
ccaagtattctagagcaggttgtcaactgtaaagatgagcttgcccaattttatctcatg
gagtgcataatccaggtttttccagatgaataccacttgcagacacttgagacactctta
ggggcttgcccccaattgcagcccacagtagacatcaagacagtgttatctcagctaatg
gacaggttgtccaattatgctgcctcaagtactgaagtattacctgaatttttgcaagtg
gaagcatttaccaaactaagcactgcaataagcagggtgatcgaagcacaggttgacatg
cctattgtgggtgcaatagctttgcatgtctctcttcttacatttactcttcgtgttcat
ccagatcgacttgattatgtggatcaagtactgggatcatgtgtcaataagctgtctgga
aaaccaaagcttgatgacaatagagccacaaagcaagttgttgcacttttaagtgcccca
cttgataaatacaatgacgttgtgactgcactgacactttccaattatcctcgtgttatg
gatcatcttgataacgtgacaaataaactcatggctctggttattatccaaagcattatg
aagaataacacttatatatctactgccgataaggttgaagttttatttgaattaataaaa
gggctcataatagatttggacggaacatctgaggatgagatcgatgaagaagatttcagt
gaggaacaaaactctgttgcccgcctcataaacatgcttcataataatgacccagaggaa
atgttcaagataatatgtacagtaaggaaacatattatgattggaggaccaaggcgccta
cctttcactgttccttctcttatattttctgcactgaagttgatcaggcaattgcaaggc
caaggtggagacatagcaggagaagaagaacctgcaacacccagaaaaatatttcagctt
ttaaacgagaccatcgaagttctatcttctgtatcatcttctgaactggccctgagactg
tatctgcactgtgctgaggctgctaatgactgtgacctcgagccggttgcttatgaattt
ttcactcaggcatttgtattatatgaagaagaaattgcggactctaaagcccaggtaact
gcaatacatttaattatcgggactctccagagaatgagcatctttggcgttgagaacagg
gatacattaacacacaaggccacagggtattctgcaaaacttttgaagaagcctgatcag
tgtcgagctgtttatgcatgctcacatctcttttgggttgatgatcaagatggtattaag
gatggagaaagggtgttgctttgcctcaagcgtgctttgaggatcgcaaatgctgctcag
caaatggccaatgtagccaggggtagcagtggtccagttacgctttttgttgaaatactg
aataagtacatttactattttgagaaaggaaatccacagatcactagtgctgctatccag
gggcttatagaattaatcaagactgagatgcagagtgactctgcatcagcccttccagct
tcagatcctttctttgctagcacactgaggtacatacaatttcaaaaacagaagggcggt
atactgggtgaaaaatacgattctatcaaggtctaa
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