Medicago truncatula (barrel medic): 11413286
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Entry
11413286 CDS
T01716
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11413286
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11413286
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11413286
NCBI-ProteinID:
XP_003601872
UniProt:
G7J2L6
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Position
3:42528586..42530945
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AA seq
408 aa
AA seq
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MAFATILVFHFLLLAPVLIYSSHHVEDPESVVQQVQKSIIENQNRRKLGYYDACGTNNPI
DDCWRCDPNWENNRKRLAECAIGFGRRAIGGKDGKYYMVIDSSDDPVNPKPGTLRHAVIQ
QEPLWIIFKHDMVIKLKMDLLMNSFKTIDGRGVNVHIAEGPCIRIQEKTNIIIHGIHIHH
CVRGGSGYVSDSPNHRVRKERSDGDGITIYGAAHIWVDHCSLSNCFDGLIDVVHGSTAVT
ISNNYMTRHNKVMLFGHSDSYEGDKNMQATIAFNHFGEGLGGRMPRCRFGYFHVVNNDYT
HWQQYAIGGSSSPTIFSQGNRFLAPDDDDHKEITKHFYSSKGEWENWNWRSEGDLMLNGA
YFTPSGAGASSSTYAKASSMSARPPMLVASMTAGAGVLRCKKGYQCYY
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgctaccatactagtgttccatttcttgcttcttgctccagttttgatttat
tcttctcatcatgttgaagatcctgaatcagtggtccaacaagtgcagaagagcatcatt
gagaatcagaacagaagaaaactgggttattatgatgcttgtggtacaaacaatccaatt
gatgattgttggagatgtgaccccaattgggaaaacaaccgcaagagactagcagaatgt
gctattgggttcggtagacgtgcaattggaggtaaagatggaaaatattacatggtcatt
gactcaagtgatgaccctgtgaatcctaagccaggaacattaagacatgctgttatccaa
caagagcctttatggatcattttcaagcatgacatggtgatcaaactaaagatggatctt
ctcatgaattctttcaaaacaattgatggtagaggtgtaaatgtacacattgctgaagga
ccatgtattagaatacaagaaaagaccaacatcataattcatggtatacacattcatcat
tgtgtacgaggtggtagtggttatgtgagtgactctcctaaccatcgtgttaggaaagaa
agatcggatggtgatgggattacaatatatggtgcggctcatatttgggtggatcattgt
tccttgtcaaattgttttgacggtttgattgatgttgttcatggatcaacggctgttact
atttctaataattatatgacacgtcataacaaagttatgctctttggtcatagtgattcc
tatgaaggggacaaaaatatgcaagctactatagcttttaaccattttggagaagggctt
gggggaagaatgccaaggtgcaggttcggatactttcatgtggtcaacaatgattataca
cattggcaacaatatgcaattggtggaagttcgtccccaactatttttagtcaaggcaat
agatttctagctccagatgatgatgaccacaaagagatcacgaagcatttttactcatca
aagggtgagtgggagaactggaattggagatctgaaggagatctaatgttgaatggtgcc
tacttcacaccgtctggagcgggagcatcttcttcgacatatgccaaagcctcaagcatg
tcagcacgaccacctatgcttgtggcttcaatgacagcaggagctggagtgcttagatgc
aaaaagggttaccaatgctactactag
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