Medicago truncatula (barrel medic): 11413324
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Entry
11413324 CDS
T01716
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
11413324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtr02000
]
11413324
Transporters [BR:
mtr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
11413324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
Tachystatin_B
AAA_22
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
11413324
NCBI-ProteinID:
XP_003625137
UniProt:
G7KTH7
LinkDB
All DBs
Position
7:complement(42944968..42969201)
Genome browser
AA seq
1886 aa
AA seq
DB search
MGTASRQLKVMLRKNYLLKIRHPFVTAAEILLPAIVLMLLAAVRTQVDTQIHPAQSHIQK
DMFVEVGKGVSPNFQQVLESLLDKREYLAFVPDTNETRMMIDVVSIKFPILKHVSIVYND
ELELETYIRSDAYGTCNDVRNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVT
TIMDTNGPFLNDLELGVSAVPTMQYSLSGFLTLQQMVDSFIIIIAQQHELNLSAETVNLP
LLGFHDTDFSRKVPWTQFNPTNIRIAPFPTREYTDDQFQAIVKEVMGILYLLGFLYPVSR
LISYSVFEKEQKIKEGLYMMGLNDSIFHLSWFVTYAFQFAISSAVITACTMDNIFKYSDK
TLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGTFLPYYSVNDEGVSMILKV
LASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFSACLLMMILDTLLYCAIGL
YFDKVLPREYGLRYPWNFIFKKDLWRKRSSSSKIKFTGKSSESEGNLLGRGIFNPALEAI
SLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTI
SMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGV
DEDTLESVVINMADEVGLADKINTVVRSLSGGMKRKLSLGIALIGNSKVIILDEPTSGMD
PYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGV
GYTLTLVKSAPTASIAGDIVYRYVPTATCISEVGTEISFRLPMASSSTFERMFREIESCM
KKPVSSMEISGNCEKDSHGIESYGISVTTLEEVFLRVAGCDYDEDECFEENNRSLISEAV
VSLPSNDRPSTKICYYKVCGNYKKILGFMSTMVGRACGLIFATVISFVNFISLQCCSCCL
ITTSTFWQHSKALIIKRAISARRDHKTIIFQLMIPAIFLFIGLLFLELKPHPDQISLTLS
TSYFNPLLSGGGGGGPIPFNLSFPIAEEVAQNVKGGWIQRCNSSSYKFPNSEKALVDAVE
AAGPALGPALLNMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTF
INLMNSAILRLATHNVNATIQTRNHPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASF
AVSIVKEREVKAKHQQLISGVSVLSYWISTFIWDFVSFLFPASFAIVLFYIFGLDQFVGG
VSLIPTIIMLLEYGLAIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFIMGLLP
STISANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLAVES
FIYFLLTLGLEIYPSLKLTPFKIKKWWGKINIFPHNTSYLEPLLESSPETFVTDLNEDVD
VKTERNRVLSGSIDNAIIYLRNLRKVYSEEKNHGKKVAVDSLTFSVQEGECFGFLGTNGA
GKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARKYIGYCPQFDALLEFLTVKEHLELY
ARIKSVPDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDE
PSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP
QHLKTRFGNHLELEVKPTEVSSVDLQTLCQTIQEILFDVPSQPRSLLNDLEICIGGADSV
TSGNTSIAEISLTSEMIGLIGRWLGNEERVKTLTCCTPVYDGASQEQLSEQLLRDGGIPL
PVFSEWWLSKQKFSEIDSFILCSFRGAKCQGYNGLSIRYQLPCDEDFSLADVFGLLEASR
DKLGIAEYSLSQSTLETIFNHFAANS
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgcttcacgccagttaaaggttatgctcagaaaaaactaccttctcaaaatt
cgtcaccctttcgttactgctgctgagattttgctccctgcgattgttttgatgctatta
gcagctgtaagaacacaagtggatacacaaattcatccagctcaatcgcacattcagaaa
gatatgtttgtagaagtggggaaaggtgtatcccctaactttcaacaagttttggaatcc
ttgttggataagagagagtatttagcttttgtaccagacaccaatgaaacaaggatgatg
atagacgtggtgtccatcaaatttccgattttgaagcatgttagtattgtatacaacgat
gagttagagttggaaacatacatccggtcagatgcttatggtacctgcaatgatgtaagg
aattgttcgaatcccaaaattaaaggagcagttgtatttcacgaacaaggtcctcagtca
tttgattatagcatacgtctcaatcatacatgggctttctccggttttccggatgttaca
acaataatggatacaaatggcccttttcttaatgacttagaacttggtgttagtgctgta
ccaacaatgcaatacagcttgagtgggtttttgacactccagcaaatggttgattcattc
ataataataattgctcaacaacatgaattaaacttgagtgccgaaactgtaaatcttcct
cttctaggatttcatgacactgatttctcgcgaaaagttccatggacccagtttaaccct
actaacatacgaatagctccatttcccactcgagagtacaccgatgaccagttccaggca
atagtaaaagaagtcatgggaatattgtatttattggggtttctctatccagtttctcgc
ctgataagttattctgtgtttgagaaggaacaaaagatcaaagaaggactctatatgatg
ggcttaaatgacagcatatttcatctctcttggtttgtcacatatgctttccagtttgca
atttcttctgcggtcattacagcttgcacgatggataatatattcaagtatagtgataag
acactggtgtttgcgtacttcttcatttttgggcttagtgcaatcatgctgtcatttttt
atatcaacgtttttcaaaagggccaaaacagctgtagctgttggaactctgtcatttctt
ggtacctttttgccgtattactctgtcaacgatgagggagtctctatgatcttgaaggtt
ctcgcttctctgctttcacctacggcatttgctctgggttctatcaactttgctgattac
gagcgcgctcatgttgggctccgctggagcaacatatggcgggagtcttctggagtgaac
ttttctgcatgtcttctgatgatgatacttgatacactgctctattgtgcaattggactg
tatttcgataaggttcttccaagggagtatggactgcgatatccatggaactttattttt
aaaaaggatttgtggagaaagagatcctccagttctaaaattaaatttactggcaagagt
tctgagtcagaagggaatcttttggggcgaggtattttcaatcctgctctagaagcaata
agcttagacatgaaacaacaggagcttgatggcaggtgcattcaaatcaggaatttgcat
aaagtgtatgctactaaaaaaggagattgctgtgctgttaactcattacagctgacatta
tatgaaaatcagattcttgctcttttaggacataatggagctgggaaaagcacgacgata
tcaatgcttgttggtcttcttcctcctacttctggggatgctttgatttttggaaagaac
attgtctctgatattgatgagatacggaaggttttgggtgtctgcccacaacatgatata
ctatttcccgaattgactgtgagagagcatttagaactatttgccatattaaagggtgtt
gacgaagacacattggagagcgttgttataaatatggccgatgaggtgggcctggctgat
aaaatcaacactgttgtgagatctctttctgggggcatgaagaggaaattgtcccttgga
atcgcattgattggaaatagtaaggttataattcttgatgagcctacaagtggaatggat
ccatactcaatgcgtttgacttggcagttaataaaaaaaattaagaagggcaggataatt
ttgctaacaacacactctatggatgaagcagatgaactaggtgaccggatagctatcatg
gccaatggttctctgaaatgctgcggaagctctcttttcttgaagcatcattatggagtc
ggttacactctaactcttgtaaagtctgctcctactgcttctattgctggtgatattgta
taccgatatgttccgacagcaacctgtataagtgaggttggaactgaaatttccttcaga
ctccctatggcatcctcctcaacctttgagaggatgttcagggaaattgaaagttgtatg
aaaaagcctgtttcgagcatggaaataagcggcaattgtgaaaaagacagtcacggtatt
gaaagctatggtatatctgtaacaaccttggaggaggtattcttgagagttgctggatgt
gactatgatgaagatgaatgctttgaagaaaataaccgttcgcttatatcagaagctgtg
gtttctcttccttctaatgatcgtccatccacaaaaatatgttattataaagtttgtgga
aattacaagaagattcttggtttcatgtctaccatggtggggagagcttgtggtttaatt
tttgctacagttattagctttgtcaacttcataagcctacagtgttgtagctgttgtctc
attactacgtccactttttggcaacactcgaaagccttaattattaagagggcgatatct
gcacggagagatcacaaaacaattatttttcagttaatgattcctgctatcttcttgttt
attggtcttctatttctggagctcaagccgcatcctgatcagatttcactgactctttca
acttcttattttaatcctctattgagcggtgggggtgggggtggtccaattccgtttaac
ctatcttttccaattgctgaagaggtagcacaaaatgttaaaggaggttggattcaaagg
tgtaactcaagctcatacaaattccccaattcagaaaaggcattagttgatgcagtggaa
gcagcagggccagctttgggacctgctctacttaacatgagtgaatatttgatgtctagc
tttaatgaatcctaccaatctaggtatggggcaattgtgatggatgatcagaacaccgat
ggaagtttaggctacactgtattacataacttttcttgtcaacatgctgctcccaccttt
atcaatttgatgaattcggcgattcttaggcttgctactcataatgtgaatgcgacaatt
cagacacgcaaccaccctctaccaatgacacaaagccagcacttacaacgccatgacctg
gatgccttctctgctgctatcattgtcaatatagccttctctttcattcctgcttcattt
gctgtttcaattgttaaggaacgtgaagtgaaagctaagcaccaacaactaatcagtggg
gtttctgtcctttcatactggatctctacatttatttgggacttcgtgagcttcttgttt
cctgcctcttttgccattgttctcttttacatctttggtctagatcagtttgttggagga
gtttctttgataccaacaattatcatgcttttggaatacggacttgcaattgcatcatcg
acttattgccttacatttttcttttttgaccataccgtggcacagaacgtggttctcctg
gtccactttttttctggattgatactaatggttatctcattcattatggggctcctccca
tccacaataagtgccaattcttttcttaagaactttttcagaatatctcctggattttgt
tttgccgacggtcttgcttcattagctcttctgcggcaaggaatgaaagataaaacaagt
gatggagtgtatgactggaatgttacgggtgcctccatctgttatcttgctgtcgagagc
ttcatttattttttattgacactcgggcttgaaatatatccttcgctcaaattaactcca
ttcaagatcaagaagtggtgggggaaaattaatatcttcccacataatactagttatctg
gaacctttattagaatcttccccagaaacttttgttacggacctcaatgaagacgtggat
gtgaaaacagaaaggaatagagtactttcaggttccattgacaatgccattatctacttg
cgcaatcttcgcaaggtgtattctgaagagaagaatcatgggaaaaaggttgcagtagat
tcattaaccttctcagttcaggaaggagaatgttttggttttttaggaacaaatggagct
ggaaagaccacaacgctttccatgttatgcggggaagaatctccttctgatgggactgct
tttatttttggcaaagacatatgttcccatcccaaggctgctcgtaaatatattggatat
tgtccacaatttgatgctctgttggaattcttaactgtcaaagagcatcttgagctctat
gctagaataaaaagtgttccagactacacaatagacaatgttgttatggaaaagctggtg
gagtttgacttattgaagcatgctaataaaccatcattttcacttagtggagggaataaa
agaaaactatctgttgcaattgcaatgattggagatcctcctattgtcattcttgatgag
ccgtccacaggaatggatcccattgcaaaaaggttcatgtgggatgtaatatctagaatc
tcaactagacgaggcaagactgcagttattcttactacccatagcatgaatgaagctcaa
gccttgtgcaccagaatagggattatggttggtggacaactaagatgcattggaagtccg
cagcatctaaaaacaagatttggcaatcatctagaactagaggtaaaacctactgaagtg
agctctgtggacttgcaaacactctgccaaactattcaggaaatactttttgatgtccct
tctcaacctagaagcttacttaatgaccttgaaatttgcattgggggtgctgattccgtc
acctcaggaaatacctccattgcagaaattagcttgacatcagagatgataggcttaatt
ggacgctggcttggcaacgaagaaagagtaaaaactctaacgtgctgtacacctgtctat
gatggggcctctcaggaacagttgtccgaacaattacttcgagatggtggtattccattg
cccgtgttttctgagtggtggttgtccaaacaaaaattctcagaaattgactcatttatt
ctctgttcatttcgtggagcaaaatgccagggatacaatggtttaagcatcagataccag
ttaccttgtgatgaggacttttccctggcagatgtttttggacttctggaagcaagcaga
gataagttagggattgcagagtacagcctcagccaatcaactcttgagacaatatttaac
cattttgcagctaattcatga
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