Medicago truncatula (barrel medic): 11413486
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Entry
11413486 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11413486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11413486
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11413486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP58_M
Nucleoporin_FG
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
11413486
NCBI-ProteinID:
XP_003611836
UniProt:
G7K9F1
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All DBs
Position
5:complement(6858561..6864642)
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AA seq
489 aa
AA seq
DB search
MAFNFSTPQQSQPQQTLFQPQQQQQQSPFQQQSSLFQPQQPQFQPQQQFQQQQFQAQQQQ
QQQLFLFTNDKTPASYSTNWADLHPDSQKFLLQIEERVLEYRDESQRLDQCNRLYDSSVS
NDGFEVDASHIVQELGGISTAMERQKTLLQELTSAVKDMLRNTEVAVRSFMILRPRFHYP
SGGASSATAPSQTPGATTPSLNSQPPATSMVPVFDFYSGLPKKPSPFLQQTILRFEKYIG
ECHQWIQELEQLLLLESEKNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESM
KTAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSG
TQGALVSQQTAATTPSLSIGSGSSLFNTPSSAPSTTPSLFGTPTTPAQGASWPAPSSSTP
QGSLFGSASSSLPGATSTPSLFGNSTPLFNSTPAGTSVFPSPYVSGAATGSGASFGAKNP
RSKSRTARR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaatttctcaactcctcaacaatctcaaccgcaacaaactctgtttcaacca
caacaacaacaacaacaatctccttttcaacaacagagtagtttattccagccacaacaa
ccacaatttcaaccacaacaacaatttcaacagcaacaatttcaagcacagcaacaacaa
cagcaacagttgtttttgttcacgaacgataaaacacctgcgagttacagcaccaattgg
gcagatctacatcctgattcgcagaaatttctacttcagattgaagaacgggtattggaa
tatagagatgaaagtcaaagacttgatcagtgtaatcgtctttatgattcgtctgtttcc
aacgatggatttgaggttgatgctagccacattgttcaggaacttggtggaatcagcact
gctatggaacggcagaaaactttgctacaggaattaacgtcggctgttaaagatatgtta
cgtaatacagaggttgctgttcgatcctttatgatcctacgtccaaggttccattatcct
agtgggggagcatcaagtgccactgccccatcacagactcctggagcaacaacacctagt
ttgaacagccaaccaccagctacatctatggtgcccgtttttgatttctacagtggtctt
ccgaagaaaccatcaccctttttacagcaaacaattcttagatttgagaaatatattggt
gaatgtcatcagtggattcaagagttagagcagctgcttctcctagaatctgaaaaaaat
gcttccagtaatggatcctcgttattgcaatctcttcccaaagtcatgacaaatgtacat
gacttttttgttcacgtggctgcaaaggtggagagcattcaccagtacatggaatccatg
aaaacagcatacctagctgatcagcgccgtcgaggggaggtgaatgatccatttctagag
gctgatcggcgagaaactgcaagacaagaagcagcatcaaaaagagttcaccctacattg
catttacctgcaaattcacaaccctcaactcaagttgctgggttgttttccagttcagga
actcaaggagcattggtttcccaacagaccgctgcaacaactccgtctttgtcaatagga
agtggttcatctctttttaacacaccgtcttcagccccatcaactacgccatctttgttt
ggaacaccaacaactcctgctcaaggagcctcatggcctgcaccatctagttctacgcct
caaggctcactttttggttctgcctcatcatccttacctggtgcaacatcaactccctct
ctgttcggtaatagtacgccattgtttaactcaactccggctggaacttcagtctttcca
tctccctatgtttcaggtgctgcgacaggatcaggagcaagctttggggctaaaaatcca
cggtcgaaatctagaactgctcggcgctaa
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