Medicago truncatula (barrel medic): 11413506
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Entry
11413506 CDS
T01716
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
11413506
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11413506
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
11413506
Protein phosphatases and associated proteins [BR:
mtr01009
]
HAD phosphatases
Fcp/Scp phosphatases
11413506
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
11413506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
11413506
NCBI-ProteinID:
XP_039684060
LinkDB
All DBs
Position
7:complement(31473197..31485505)
Genome browser
AA seq
861 aa
AA seq
DB search
MNRLGLKVEVFEGDARLGELDYFPVIAFQNFRFPNNEIHIHHRTFRSERCPPLSILQSVS
AFNVRCKLDSSLSVEQPLLINLHASMFHEMKTAVAVIGDEELHLVAMPSKRKKFPCFWCY
TVPARLYDACMGMLNLRCLSIVFDLDETLIVANTMKSFEDRIDALRSWLSRETDPSRVQG
MSGELKRYLEDRLLLKQFAESDCVVDGNGRQYQVQMEEVPSLSEQKVMRPVVRLQDRNIV
LTRINPEIRDTSVLVRLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGA
HLIGSKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENYLQRIAEIFFEDEVGSLPHPP
DVSSYLMSEEVPNGNGNAPISEGMAGAEVERRLNQPDDKLSADLVSRPMVNSVEFRHETS
QPTAGITPNVAGPGSSRPLIPSQKPGLLGPPLKHDGSFIDRDNDMKKGLLTTRHGPDLRG
QSSAEPPLISRPPIPSYGGWLVDDDISNKTQTNNWPFASAKESNLPKSEKHQAQPKPFSH
RMEVSASTVPLSQASKLKAEEATSVSDFQRRNIPSKSRLTEDVISPNHTSSNSKDFQNEV
GKFDPSLSIGVLQEIGKRCSSKVEFKPIVSTSKDLQFSVEVLFTGEKIGFGMGRTRKDAQ
QQAAENALRSLAEKYLGHMEPQSKAVNTEFDKLSIEHENGFLWDVVNPESVELQTEDGLQ
RESASEASDAETLPLNPNPINQQIEKRASFPSLLTTKVIGIRSFGEVEEHDTPICNTEIK
QFSIVEKSPGSFSLLNAFSSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggttagggttaaaagttgaagtgtttgaaggcgacgcgcgtttgggcgaactc
gattattttccagtaatcgcttttcagaattttcgattcccaaacaacgagattcacatc
catcatagaactttccgtagtgaacgttgtcctcctctttcgattcttcaatctgtttcc
gctttcaatgttcgatgtaaactcgattcatcgctttctgttgaacaaccgcttttgatt
aatcttcatgcttcgatgttccatgaaatgaagacggcggtggcggtgattggagacgaa
gagcttcatttagtggcgatgccgagcaaacggaagaagtttccatgtttttggtgctat
acagttccggctagactttatgatgcgtgtatggggatgttgaatttgaggtgtttatcg
attgtgtttgatttagatgagactttgattgttgcgaacacgatgaagtcatttgaggat
aggattgatgcgttgcggagttggctttcgagggagactgatccgtcgagggtgcagggg
atgtctggtgagttgaagcggtatttggaggatagattgttgttgaagcagtttgctgag
agtgattgtgttgttgatgggaatgggaggcagtatcaggttcaaatggaggaagtgccg
tctttgtctgaacagaaagttatgaggcctgttgttaggttgcaagataggaatattgtt
cttactcgaatcaatcccgagatccgtgacactagtgtactagtgaggttacggcctgct
tgggaggatttaagatgctatttaactgcaaaaggacgcaagcggtttgaagtgtatgtt
tgtactatggctgaaagggattatgctttggaaatgtggaggcttcttgacccaggggca
catcttataggttcaaagcaagtttttgatcgggttatttgtgttaaatcaggctcccgg
aaatctttactaaatgtttttcacgatggtatgtgccatccaaaaatggcaatggtgatt
gatgaccgttcaaaggtttgggaggacaaggaccagcctagggttcatgtcgttcccgcc
tttactccttactatgctcctcaagcagagacagccaatgccgtcccagtcctatgtgta
gcaagaaatgttgcatgcaatgtcagaggttgttttttcaaggagtttgatgaaaactat
ttacaaagaattgctgaaatcttctttgaagacgaggttggaagtttacctcaccctccg
gatgtgagcagctatttgatgtctgaggaggtaccaaatggtaatggtaatgcccccatc
agtgaaggaatggccggagcagaggttgaacggaggttaaaccaacctgatgataagctt
tctgctgatttagtcagtcggcccatggtaaatagtgttgagttcagacatgaaacctct
cagccaactgctggcataactccaaatgttgctggtcctggatcttcaaggcccctgatt
ccttctcagaaacctggtctgcttggacctccactcaaacatgacggcagttttattgat
cgtgataatgacatgaaaaaaggactattaactacgaggcatggtccagatttaagaggt
caaagttcagctgaaccccctctgatatcaaggccgcccattccatcatacggaggctgg
ttggtagatgatgatataagcaacaaaactcagacaaataattggccttttgcatctgct
aaagaatccaatttgccaaagtctgaaaagcatcaggctcaaccaaaacccttttctcat
agaatggaagtttcagcctccactgttccgctctcacaagcatcaaaacttaaggctgaa
gaggcaacttctgtatctgattttcagaggcgaaatattccatctaagtctcggctaaca
gaggatgtgatatctccgaatcatacatcttctaatagcaaagattttcaaaatgaagtt
ggaaaatttgacccatctctatctattggagtgctgcaagaaattgggaagcggtgttcc
tctaaggttgaatttaagccaattgtaagcaccagcaaagacttgcagttttcagtggag
gtactattcactggtgagaaaatcggctttggtatgggcaggacaaggaaggatgctcaa
caacaagctgccgagaatgcccttcgcagcttagcagagaagtatctaggacatatggag
cctcaaagtaaagccgttaatacagaatttgacaagctttctattgaacatgaaaatggt
ttcttgtgggatgtggtcaatccggaatctgttgaactgcagacagaagatggattacaa
agagaaagtgcttctgaggcttcagatgctgagaccctgccattgaatcccaatcccatc
aatcagcaaatagaaaaacgtgccagcttcccaagtttgttgacaaccaaagtcataggt
attcgttcatttggtgaagttgaagagcatgacactccaatttgcaacacagaaatcaaa
caattctccatagtagagaagtctccaggttccttctctcttcttaatgctttctcttca
ctgtaa
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