Medicago truncatula (barrel medic): 11413561
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Entry
11413561 CDS
T01716
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11413561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11413561
03012 Translation factors [BR:
mtr03012
]
11413561
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
11413561
Translation factors [BR:
mtr03012
]
Eukaryotic type
Release factors
11413561
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
11413561
NCBI-ProteinID:
XP_024637693
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Position
4:50842208..50847308
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AA seq
436 aa
AA seq
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MADAHDTDKNIGVWKIKQLMKNLEAARGNGTSMISLIIPPRDQISRVTKMLANEYGTASN
IKSRVNRQSVLGAISSAQQRLKLYNKVPPNGLVLYCGTILTDDEKEKKETFDFEPFRPIN
ASLYLCDNKFHTEPLNEILESDDKYGFIVMDGNGTLFGTLSGNTREVLHKYTVDLPKKHG
RGGQSALRFARLRTEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSKS
DMFDPRLQAKLLNVVDVSYGGEMGFNQAIQQSSEILSNVKFIQEKRLIEKYFEEIGQDTG
KSVYGVDDTLQALDAGAVETLIVWENLDMTRYVLKNSTTGEIVIKHFNKQQEANQSNFRD
PENSSDYEVQEMLSLVEWFANEYKQFGCTLEIVTNKSQEGSQFCKGFGGIGGMLRYQLDM
RTFDDFSDDGSVSDDK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctcatgatactgataagaacattggggtgtggaaaatcaagcaattgatg
aagaatcttgaagctgccagaggaaatgggacaagtatgatttctcttatcatacccccg
cgtgatcaaatatctcgtgttaccaagatgcttgccaatgagtatggaactgcttcaaac
atcaaaagtagggtgaatcgacagtctgtgcttggtgcaatcagttctgcccagcagagg
cttaagctttataacaaggttcctccaaatgggcttgttttgtattgtggcacaattttg
actgatgatgagaaggagaaaaaggagacctttgattttgaaccatttagacctatcaat
gcgtctctctatctttgtgacaacaagtttcacactgaacctctgaatgagatcctggaa
tctgatgacaagtatggatttattgtcatggatggtaatggcacactatttgggaccttg
agtggtaatacaagggaggtgcttcacaagtataccgtggatcttccaaaaaaacatgga
agaggagggcaatcagccctacgttttgcccgtcttcgcacagagaagcgtcataactac
gtgaggaagactgccgagcttgcaacccagttttatatcaatcctgctaccagccagcct
aatgtttctggattaatacttgctggttctgctgatttcaaaactgagcttagtaagtca
gatatgttcgatccccgtcttcaggcaaaactacttaatgttgtagatgtatcttatgga
ggggagatgggatttaatcaggctattcaacaatcttctgaaattctgtccaatgtcaag
tttattcaggagaaacgcttgattgaaaaatactttgaggaaatcggtcaagatacgggg
aagtctgtctatggtgttgatgatactctacaagctctggatgcaggagctgttgagaca
cttattgtctgggaaaatctggatatgactaggtatgttttaaaaaatagtactaccggg
gaaattgtcattaaacacttcaacaagcaacaggaagccaaccaaagtaattttagagat
cctgaaaactcttctgattatgaggttcaggaaatgctgtctctggttgagtggtttgca
aatgaatacaaacagtttggttgcactcttgagattgtcaccaacaaatcgcaagaaggt
tcacaattttgcaaaggctttggtgggataggtgggatgctgcgttaccagcttgatatg
agaacatttgatgatttttctgatgatggaagtgtgtctgatgacaaatag
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