Medicago truncatula (barrel medic): 11413589
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Entry
11413589 CDS
T01716
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
11413589
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11413589
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
11413589
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
11413589
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Helicases
11413589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
HerA_C
Motif
Other DBs
NCBI-GeneID:
11413589
NCBI-ProteinID:
XP_003606390
UniProt:
G7JPD2
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All DBs
Position
4:complement(30092744..30099418)
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AA seq
613 aa
AA seq
DB search
MATMNKKTKAKVVKSKEKEKKKTTTHDDGTNKGDNNNNVFASCSFSSLGLHQTLCDQLRE
RMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTF
ALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRL
LDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQESGVPRPS
KFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSRIRFDNSDCDEDNEDTHS
SKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCDAVDFH
YSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDV
SARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPSEIDYLQDLEKHG
VSLVEYPLLKVLDSFPLSAHKNNIKKSVFIDMHPWIMCLQKALESCISSKPKMEELAKRA
FCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFGLKQIPSLVGKSFQNQTKKRKRFEKKN
GPSNKRKVARRVT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccacgatgaacaagaagaccaaagccaaagtggtgaaaagcaaagaaaaagagaag
aagaaaactactactcatgatgatggaaccaacaaaggagacaataacaacaacgttttt
gcttcatgttccttttctagtctcggtcttcaccaaaccttatgtgaccaacttcgtgaa
agaatgggttttgaagctccaacattaattcaagctcaagctattcctgttgttctctct
ggtcgtcatgcactggttaatgctgctacgggcacagggaagactattgcatacctggct
ccgataattcatcacttgcagagttatgataagagagttcagcgctccgatggaacattt
gcgttggttcttgtaccaacgcgtgagttatgtttgcaggttcacgaaattcttcagaag
ttactgcaccggtttcattggattgttccaggatacattatgggtggtgaaagtagatca
aaggagaaagccagactgcgcaaaggcatatcaattcttattgcaactcctgggcgcctt
ttagatcacttgaagaacacatcatcattcgtgtacactaatttgcgctggataattttt
gatgaagctgatcgtattttggaattaggatttggaaaagagatacaagaaatactaaat
cttttaggttcaatgaagacagggcacgatgaccaagagagtggagttccaagaccctct
aaatttcaaagacaaaacctgcttttatcagcaaccttaaatgagaaagtaaaccacctt
gctaaaattagcttagaggatccagttatgattggtattgatgataaaataatggaacca
acgtcaagaattagatttgataattcagattgtgatgaagacaatgaagacacacattcc
agtaaaataccagcaattggagcttataaagtgcccgaacagttaattcagagatatatg
aaggtgccttgtggatcacggcttgctatacttctttctattctaaagcatctttttgaa
agggaaccttcacagaaggttgtgctattcttttcaacatgtgatgccgtggactttcat
tattcattgataaccgaattccttttttcatcatatccacaaaccgaagaagggaacaga
acaatgtttctaggatgcaaaactcttcggctacatggtaatatggaacaggaggacagg
acaaccagttttcaggcctttaaaactgagaaatctgcccttcttttgtctactgatgtt
tctgccagaggcttagattttccaaatgttagatgcatcatacaatatgattctcccgga
gaagccactgaatatgtgcacagagttggaagaactgctcgacttggtgaaagaggagag
tcattgttatttctgcaaccatctgaaatagattatttacaagacttggagaaacatggt
gtctcactggtggagtaccctctcctcaaagtgttggatagtttcccactgtcagcacac
aagaacaacataaagaaatctgttttcatagacatgcatccgtggatcatgtgtctccag
aaggcacttgagtcctgcatctcgtccaagcccaaaatggaagaacttgccaagagagca
ttttgctcttgggtccgtgcatacacagcgcatcgtggggagctgaaaagaatatttatg
gttaagaaacttcacttagggcacgtagcaaaaagctttggactgaaacaaataccatcc
ttagttggaaagtctttccaaaatcaaactaagaagagaaagagatttgagaagaaaaat
gggccatcgaataagagaaaagttgcacggcgtgtgacataa
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