Medicago truncatula (barrel medic): 11413629
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Entry
11413629 CDS
T01716
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
11413629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11413629
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
11413629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
11413629
NCBI-ProteinID:
XP_003612000
UniProt:
G7KDK7
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All DBs
Position
5:complement(7718578..7726979)
Genome browser
AA seq
1048 aa
AA seq
DB search
MDSMDFKASELLKEVQVDDYSQISKPVDDAVAAIESSIDSIPDNYNVTADLAPSFVRDIG
ADKVEFKFKKPLVIQKGGSYSIESLARPELNLDLIIRLPKECFHEKDYLNYRYHAKRCLY
LCLVKKYLEKSPSIGRVEWSTLQNEARKPVLIVYPAAKLVDVDGFFVRIIPSAKDIFSIP
KLNMTRNNIHNSKNEGSSVQATPKYNSSILEDMYMEDTKLINEFFLGWKQLREALILLKV
WARQRSSIYVHDCLNGFLLSVILAHLASRQQISRSMKAIEIIRITLNFIATSETWSRGLY
FPKEGEGNITKEDRMQLKGSFPVVMCHPSGAFNLAFRMSRIGFSQLQDEAALTLKCMEKC
RGGGFEEVFMTKIDYAVKYDYCMRINFKGNKELYASGFCMDDECWRLYEEKIHAILAKGL
NDRAKFIRVIWRNAQCQWSVNDGLSILDKEPLFIGISVSDLEKAFRMVDIGPNAESKEQA
LEFRKFWGEKSELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSRHLSLSKENIVVV
VDQLDFSLAHGAVDPIAHSGNLLEAFDLLSKRLRLIEGLPLKVSSVQPLDSAFRFTSVFP
PEPHLLANEKIGSLRLNKLVPSCIQPLEIMIQLEGSGHWPMDEIAIEKTKSSYLIQIGKS
LQKKWGMTCTATEEDVDVLMSGYAFRLKILHERALSLLKEIGNDKKTRVHSADKKLLIRG
QHASMINGLQSRYPIYGPIVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFNAPCS
RITGFMRFLQLLSNYDWTYSPLVVDINNDLSPSDRKEINDNFLLRRKSQGENEQAVGPVM
FLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLMKLTFQEEIGPYRWECLLRTPLN
NYDAIILLHKDKLAYPQRLLFSSEVGHGTQVAKGHAGKFFQPFLLPKDLKGRRPEELKNK
LLVDFDPSRCFIKDLEKEFSTKFQLWRDSLGGDAIGLTWEKSYPSKKRKQEEVVEEGYDP
RKVLKAVGEVGKGFVRSIYFLKPPRLAN
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggattcaatggatttcaaggcgagtgaactcttgaaagaagttcaagtagatgattac
tcacagatttctaaacccgttgatgacgccgtcgccgctatcgaatcttccatagacagt
atccctgataactataatgttactgctgatttggcaccgagttttgttagggatattggt
gctgataaagtggagttcaaatttaagaaaccattggttattcaaaagggtggtagttac
tctattgagagtcttgctaggcctgaattaaatttggatcttattataaggttacctaag
gagtgcttccatgagaaggattatttgaactacaggtaccatgccaagaggtgtctttat
ctctgcttggtgaaaaagtatttagagaaatctccatctattggtagggttgaatggtct
accctgcagaacgaagctcgaaagcctgtattgattgtgtatccagctgcaaagcttgtt
gatgttgatggtttttttgtgagaattattccatcggccaaggatatctttagcatacca
aagttaaacatgacgcgtaataacattcataattcaaagaatgaaggaagttccgttcaa
gctacaccaaagtataattctagtattttagaagacatgtatatggaggatacaaaatta
atcaacgaattttttcttggatggaagcaactaagagaggctttaatcctacttaaggta
tgggctcgacagagaagttcaatatatgttcatgattgcctgaatggatttttgctatcc
gtcatactggcacaccttgcttctaggcaacaaattagtaggtcaatgaaggcaattgaa
ataattcgcattaccttgaacttcattgccacttcagagacatggagtcgaggtctctac
tttccaaaggaaggcgaaggaaatattactaaagaggacagaatgcaacttaaagggtca
tttccagttgtcatgtgtcatccatcgggggcattcaatttggcttttcgaatgtctagg
attggtttttctcagcttcaagacgaggctgctttgacacttaaatgcatggagaagtgt
agaggtggtggatttgaggaagtttttatgaccaagattgactatgctgttaaatatgat
tattgtatgagaataaactttaagggaaacaaggagctatatgcatcagggttttgtatg
gatgatgaatgctggagattgtacgaggagaaaatacatgctattttagctaaaggattg
aatgatagagcaaaatttattcgagtaatatggagaaatgcacaatgccagtggagcgtg
aatgatggcttgtcaattcttgataaagagcccttgttcataggaatttcagtcagtgat
ttggagaaagcatttaggatggttgatattggtccgaatgctgaaagtaaagaacaggct
cttgaatttcggaagttttggggagaaaaatccgagcttagaagatttaaagacagtaga
attgcagaaagcacagtatgggaatgtcagaaatgggaaaggcatctgattttgaaaaat
atagccgagcatgtgcttagtcggcatctatctctatccaaggaaaatattgtagtagtt
gtggatcaacttgatttctctttggctcatggtgctgtagatccgatagcacactctgga
aatttgctcgaggcatttgatcttctatcaaagcgtttgcgtcttattgaaggcctccct
ttgaaggtgtctagtgtacagcctttagactctgcattcaggtttacatcagtcttccct
cctgaacctcatcttctagctaatgaaaaaattggatctctcagactgaataagttggtt
ccatcatgcattcaaccactagaaattatgattcagctggaaggttcggggcactggcca
atggatgaaattgcaattgaaaaaacaaaatctagttaccttattcaaataggaaaaagt
cttcaaaagaagtgggggatgacatgcactgcaactgaggaagatgtggatgtgttaatg
tcaggatatgcatttcgtcttaaaattttgcatgagagggcccttagtttactcaaagaa
attgggaatgataaaaaaacgcgggtacattcggcagacaagaaacttttgattcgtggt
caacatgctagcatgattaatggactacaaagtcgttacccaatatatggaccaatagtt
agactagcaaaacgttgggctgcttcacatctattttctgcttgtttggtagaggaggcc
attgagcttttggttgcttatctctttcttaatcctttgccatttaatgctccctgctcg
cggatcaccgggtttatgaggttcctgcagttgctctcaaactatgattggacttattct
cctttggttgttgacataaataatgacttgagcccgagtgatagaaaagaaataaatgat
aactttttgctaagaagaaaaagtcagggagagaatgagcaagctgtagggccagtgatg
ttcttggctacagtttatgataaagcatctgaggcttggactggattatcacctagtgca
ctggaacttaaaaggttagttgcatatgctcgaagcagtgcaaatttgttgatgaaactc
acatttcaggaggaaattggtccatacagatgggagtgccttttgcgaactcctttaaat
aactatgatgcaatcattcttctccacaaggacaaactcgcatatcctcagaggcttctc
ttctcatcagaagttggtcacggaacacaagttgctaaaggacatgctggtaagttcttc
caaccctttttgttgcctaaagatttgaagggtaggcggcctgaggaacttaaaaataag
ttgctggtagactttgatccatcaaggtgctttatcaaagatttagagaaagagttttcc
accaaattccaattatggcgtgattctttaggaggcgatgccatcggcctgacgtgggag
aaatcgtatccttccaagaagcggaaacaagaggaagtggtcgaggaaggatacgaccct
cggaaggtgctaaaagctgtaggtgaagttggaaaagggtttgtgagaagtatatacttt
ctcaagccaccaaggctcgcaaattaa
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