KEGG   Medicago truncatula (barrel medic): 11413629
Entry
11413629          CDS       T01716                                 
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    11413629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mtr03009]
    11413629
Ribosome biogenesis [BR:mtr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    11413629
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap_D2 Nrap Nrap_D6
Other DBs
NCBI-GeneID: 11413629
NCBI-ProteinID: XP_003612000
UniProt: G7KDK7
LinkDB
Position
5:complement(7718578..7726979)
AA seq 1048 aa
MDSMDFKASELLKEVQVDDYSQISKPVDDAVAAIESSIDSIPDNYNVTADLAPSFVRDIG
ADKVEFKFKKPLVIQKGGSYSIESLARPELNLDLIIRLPKECFHEKDYLNYRYHAKRCLY
LCLVKKYLEKSPSIGRVEWSTLQNEARKPVLIVYPAAKLVDVDGFFVRIIPSAKDIFSIP
KLNMTRNNIHNSKNEGSSVQATPKYNSSILEDMYMEDTKLINEFFLGWKQLREALILLKV
WARQRSSIYVHDCLNGFLLSVILAHLASRQQISRSMKAIEIIRITLNFIATSETWSRGLY
FPKEGEGNITKEDRMQLKGSFPVVMCHPSGAFNLAFRMSRIGFSQLQDEAALTLKCMEKC
RGGGFEEVFMTKIDYAVKYDYCMRINFKGNKELYASGFCMDDECWRLYEEKIHAILAKGL
NDRAKFIRVIWRNAQCQWSVNDGLSILDKEPLFIGISVSDLEKAFRMVDIGPNAESKEQA
LEFRKFWGEKSELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSRHLSLSKENIVVV
VDQLDFSLAHGAVDPIAHSGNLLEAFDLLSKRLRLIEGLPLKVSSVQPLDSAFRFTSVFP
PEPHLLANEKIGSLRLNKLVPSCIQPLEIMIQLEGSGHWPMDEIAIEKTKSSYLIQIGKS
LQKKWGMTCTATEEDVDVLMSGYAFRLKILHERALSLLKEIGNDKKTRVHSADKKLLIRG
QHASMINGLQSRYPIYGPIVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFNAPCS
RITGFMRFLQLLSNYDWTYSPLVVDINNDLSPSDRKEINDNFLLRRKSQGENEQAVGPVM
FLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLMKLTFQEEIGPYRWECLLRTPLN
NYDAIILLHKDKLAYPQRLLFSSEVGHGTQVAKGHAGKFFQPFLLPKDLKGRRPEELKNK
LLVDFDPSRCFIKDLEKEFSTKFQLWRDSLGGDAIGLTWEKSYPSKKRKQEEVVEEGYDP
RKVLKAVGEVGKGFVRSIYFLKPPRLAN
NT seq 3147 nt   +upstreamnt  +downstreamnt
atggattcaatggatttcaaggcgagtgaactcttgaaagaagttcaagtagatgattac
tcacagatttctaaacccgttgatgacgccgtcgccgctatcgaatcttccatagacagt
atccctgataactataatgttactgctgatttggcaccgagttttgttagggatattggt
gctgataaagtggagttcaaatttaagaaaccattggttattcaaaagggtggtagttac
tctattgagagtcttgctaggcctgaattaaatttggatcttattataaggttacctaag
gagtgcttccatgagaaggattatttgaactacaggtaccatgccaagaggtgtctttat
ctctgcttggtgaaaaagtatttagagaaatctccatctattggtagggttgaatggtct
accctgcagaacgaagctcgaaagcctgtattgattgtgtatccagctgcaaagcttgtt
gatgttgatggtttttttgtgagaattattccatcggccaaggatatctttagcatacca
aagttaaacatgacgcgtaataacattcataattcaaagaatgaaggaagttccgttcaa
gctacaccaaagtataattctagtattttagaagacatgtatatggaggatacaaaatta
atcaacgaattttttcttggatggaagcaactaagagaggctttaatcctacttaaggta
tgggctcgacagagaagttcaatatatgttcatgattgcctgaatggatttttgctatcc
gtcatactggcacaccttgcttctaggcaacaaattagtaggtcaatgaaggcaattgaa
ataattcgcattaccttgaacttcattgccacttcagagacatggagtcgaggtctctac
tttccaaaggaaggcgaaggaaatattactaaagaggacagaatgcaacttaaagggtca
tttccagttgtcatgtgtcatccatcgggggcattcaatttggcttttcgaatgtctagg
attggtttttctcagcttcaagacgaggctgctttgacacttaaatgcatggagaagtgt
agaggtggtggatttgaggaagtttttatgaccaagattgactatgctgttaaatatgat
tattgtatgagaataaactttaagggaaacaaggagctatatgcatcagggttttgtatg
gatgatgaatgctggagattgtacgaggagaaaatacatgctattttagctaaaggattg
aatgatagagcaaaatttattcgagtaatatggagaaatgcacaatgccagtggagcgtg
aatgatggcttgtcaattcttgataaagagcccttgttcataggaatttcagtcagtgat
ttggagaaagcatttaggatggttgatattggtccgaatgctgaaagtaaagaacaggct
cttgaatttcggaagttttggggagaaaaatccgagcttagaagatttaaagacagtaga
attgcagaaagcacagtatgggaatgtcagaaatgggaaaggcatctgattttgaaaaat
atagccgagcatgtgcttagtcggcatctatctctatccaaggaaaatattgtagtagtt
gtggatcaacttgatttctctttggctcatggtgctgtagatccgatagcacactctgga
aatttgctcgaggcatttgatcttctatcaaagcgtttgcgtcttattgaaggcctccct
ttgaaggtgtctagtgtacagcctttagactctgcattcaggtttacatcagtcttccct
cctgaacctcatcttctagctaatgaaaaaattggatctctcagactgaataagttggtt
ccatcatgcattcaaccactagaaattatgattcagctggaaggttcggggcactggcca
atggatgaaattgcaattgaaaaaacaaaatctagttaccttattcaaataggaaaaagt
cttcaaaagaagtgggggatgacatgcactgcaactgaggaagatgtggatgtgttaatg
tcaggatatgcatttcgtcttaaaattttgcatgagagggcccttagtttactcaaagaa
attgggaatgataaaaaaacgcgggtacattcggcagacaagaaacttttgattcgtggt
caacatgctagcatgattaatggactacaaagtcgttacccaatatatggaccaatagtt
agactagcaaaacgttgggctgcttcacatctattttctgcttgtttggtagaggaggcc
attgagcttttggttgcttatctctttcttaatcctttgccatttaatgctccctgctcg
cggatcaccgggtttatgaggttcctgcagttgctctcaaactatgattggacttattct
cctttggttgttgacataaataatgacttgagcccgagtgatagaaaagaaataaatgat
aactttttgctaagaagaaaaagtcagggagagaatgagcaagctgtagggccagtgatg
ttcttggctacagtttatgataaagcatctgaggcttggactggattatcacctagtgca
ctggaacttaaaaggttagttgcatatgctcgaagcagtgcaaatttgttgatgaaactc
acatttcaggaggaaattggtccatacagatgggagtgccttttgcgaactcctttaaat
aactatgatgcaatcattcttctccacaaggacaaactcgcatatcctcagaggcttctc
ttctcatcagaagttggtcacggaacacaagttgctaaaggacatgctggtaagttcttc
caaccctttttgttgcctaaagatttgaagggtaggcggcctgaggaacttaaaaataag
ttgctggtagactttgatccatcaaggtgctttatcaaagatttagagaaagagttttcc
accaaattccaattatggcgtgattctttaggaggcgatgccatcggcctgacgtgggag
aaatcgtatccttccaagaagcggaaacaagaggaagtggtcgaggaaggatacgaccct
cggaaggtgctaaaagctgtaggtgaagttggaaaagggtttgtgagaagtatatacttt
ctcaagccaccaaggctcgcaaattaa

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