Medicago truncatula (barrel medic): 11413893
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Entry
11413893 CDS
T01716
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11413893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11413893
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11413893
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Paralog
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Motif
Pfam:
RRM_1
Linker_histone
RRM_YTH1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
11413893
NCBI-ProteinID:
XP_024639446
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All DBs
Position
1:complement(43208147..43215374)
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AA seq
448 aa
AA seq
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MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD
AICECDGYDFDGCRLRVEAAHVGYCNSSSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPS
SASCQDLKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIKNLDGSEFQNAFSRS
YVHVREYDSSRDSRSPGRGPSQSRGRRYSHSRRCSRSRSYSPGHSQSKFPKGKSSQRSPA
RLVSRSRSRSRSCSLSGPRSRPRSPLPLRNKSPKKHSASRSPSRSRTRSKSLSRMDNLIM
EAISSLNEVGGSNETRIANFIEDHHGSPSNFKESLSARLKSLTSSGKLIKVKKYRIAPTS
AYPERGRQSPALEGRQNASMNCDRDLSYSPTQSELDFQLAMIMSVSAQEAATFAEVEALI
EEAAEAYVEAAGERLKGRNNPKDGDPCF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacatttgagcagaactgtctatgttgggaatctacctggcgatatccgtgaa
agagaagttaaacatttgtttatgaagtatggtcacataactcgcattgatctaaaggtt
ccgccaagacccccttgctatgcatttgtagtgtttaaagatgctctaaatgctgacgat
gcaatttgcgagtgtgatggctatgattttgatgggtgccgattacgggtcgaagctgca
catgttggttattgtaattcatcttcaagagatcgatacagtattcacagcaatggccag
ggtggtcgaggagtatccagtcactctgaatatcgtgttctagtcaatcgactgccctct
tctgcatcctgccaggatcttaaggatcacatgcgaaaagccggggctgtttgcttttcc
caggttgttcatgatggaagggttactactgggattgtggattacacgaactgcgatgat
atgaaatatgctatcaaaaaccttgacggctctgagttccagaacgctttttccaggtct
tacgttcatgtgagggaatatgattcgagtcgggactctagaagtcctggtcgtggccct
tctcaatctaggggaagaagatatagccacagtcgcaggtgcagccgcagccgtagctac
agtccaggacatagccaaagcaaatttcctaagggtaaatcctcacaacgttcaccagca
agattagtttctcgttctcgctccagatctagatcctgttctttatcaggaccacgatca
aggcctaggtctccattacctctgcgtaataaaagccccaaaaagcacagtgctagcagg
agtccaagtaggagcaggacccgtagcaagagtttgtccagaatggataaccttataatg
gaggctatatctagcttgaatgaggtgggtggttctaatgaaacaaggattgctaatttc
atagaggaccaccacgggtcaccctcaaacttcaaagagtcgctgtcagcaagactgaag
tctctcacatctagtggaaaactgatcaaggtgaaaaaatacaggattgcacctacctca
gcatatccagaaagaggaagacaatcacccgcgttggaagggaggcagaatgcctctatg
aactgtgacagggatttgagctatagccccacacagtctgagttagactttcaattagca
atgataatgtccgtgtctgcacaagaggcagccacatttgctgaagtggaagccctcata
gaggaagctgcagaagcttatgtagaagctgcaggggaaagactgaaggggagaaacaac
cccaaagatggtgatccctgcttttga
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