Medicago truncatula (barrel medic): 11414029
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Entry
11414029 CDS
T01716
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
mtr03410
Base excision repair
mtr03420
Nucleotide excision repair
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
11414029
03410 Base excision repair
11414029
03420 Nucleotide excision repair
11414029
03430 Mismatch repair
11414029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
11414029
03036 Chromosome and associated proteins [BR:
mtr03036
]
11414029
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11414029
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
11414029
DNA Replication Termination Factors
ELG1-RFC complex
11414029
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
11414029
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
11414029
Check point factors
HRAD17(Rad24)-RFC complex
11414029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_16
AAA_11
AAA_30
AAA_5
DNAX_ATPase_lid
ATPase_2
AAA_14
RuvB_N
AAA_7
DUF815
bpMoxR
ResIII
AAA_24
AAA_19
nSTAND3
AAA_3
AAA_25
SLFN-g3_helicase
NB-ARC
AAA_28
TIP49
AAA_18
MCM
TniB
Mg_chelatase
VESA1_N
Motif
Other DBs
NCBI-GeneID:
11414029
NCBI-ProteinID:
XP_003602039
UniProt:
G7J4X7
LinkDB
All DBs
Position
3:complement(43405997..43412977)
Genome browser
AA seq
355 aa
AA seq
DB search
MAEETYAMDIDVTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLT
TENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFA
STQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ
SRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMA
SQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTM
FVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAAA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagacttatgctatggacatcgacgtcacagacaagggcaaaaccgtcatt
gccgccggtaacccttccttcggtggcaaagcttcgctatgggttgaaaagtatcgtcct
caatccctcgacgacgttgcagctcaccgcgacatcgttgacacaattgataggttgact
actgagaatagattaccccatctgctgttgtatggacctcctggaacgggtaaaacatcg
acgattcttgcggtggcgcgaaaattatacggtgctcagtatcataatatgattttggaa
ctcaatgcttcagatgatagaggaattgatgttgttagacagcagattcaagattttgcc
agcactcagagcttatcatttggcgtcaagccctctgtaaaactggtcttgttagatgaa
gcagatgccatgactaaggatgcccaatttgcattacgtagagtcatcgagaaatataca
aagagcactcggtttgcacttatctgtaatcatgtaaacaagattatcccagcactgcaa
tcaagatgcacccggtttcggtttgcccctcttgatgctgtccatgtcactgagagactg
aaacatgttatcaatgctgaaaggcttgatgttcaagacagtggcttatctgctcttgtt
cggcttagcaatggtgatatgagaaaggcactgaatattcttcagtcaacacatatggcc
tctcagcagattacagaagaagctgtttatctttgcactggaaatccgttgcccaaagac
attgagcaaatatcttactggcttctaaatgaacaatattcagaaagctttaaaagaata
tatgacatgaaaacaaggaaaggactggctctgattgatattgttagagaagtgacaatg
tttgtcttcaagattaatatgccttcagccgttcgagtgcagttggtgaatgatttggct
gacatagagtacagattaagttttgggtgcaacgataagcttcagcttggatcagttgtt
gcttcatttacacgtgctagatctgcaatggttgcagctgctgcataa
DBGET
integrated database retrieval system
