Medicago truncatula (barrel medic): 11414430
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Entry
11414430 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11414430
04121 Ubiquitin system [BR:
mtr04121
]
11414430
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11414430
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
11414430
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11414430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
11414430
NCBI-ProteinID:
XP_003606705
UniProt:
G7JCE1
LinkDB
All DBs
Position
4:complement(32234936..32236626)
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AA seq
369 aa
AA seq
DB search
MNSESSPETPSYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTV
SSRRQGFRRRRRDAGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAFELFYDDGDGSGLRP
LPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEHVSCELH
CAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCPVCRHELPSDLNNPLETRVSGQ
IDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNAAQGSAPRRISRTV
RAHRVRESHGIGRVFRNFFSFFGRIGSRSNLNSNSGTGNVASVSRSRSLVNSMFSRNSRR
RRRALELED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaatcctcacccgaaacgccgtcgtactggtgctacagttgcacacgcttc
atcaatctatccgatcacaccctcatcgtttgtcctcactgcgataacggtttcgtcgaa
gagatcgccgccggcgaatccccgcatcaccgtctaagtccttttcctgcggataccgtt
tcttctcgccgacaaggcttccgccgtcgccgtcgtgacgctggtagtcgttcacctttc
aatcctgtcatcgttcttcgtggagccggtgatgatggagtcggagaagacggcgctggt
gctggtggtagcgcttttgaacttttctacgatgacggtgatggttcggggttacgtcct
ctaccaccgacggtttcggagtttttgcttggatctggatttgatcggttgttggagcag
ttttctcagatcgagatgaatggttttggacggccggagaatccaccggcgtcaaaagcg
gcgattgaatcgatgccgactgttgagatctgtgaagaacacgttagttgtgaattacac
tgcgccgtttgcaaagaagagtttgagctacacgcggaggcgcgtgagttgccttgcaaa
catttataccattccgattgcattcttccatggctgacagtgagaaactcgtgcccggtg
tgccgccatgagcttccttctgatctcaacaatcctcttgaaactagggtttctggtcaa
attgatgaagaagctatcgggttaacgatatggaggttacccggtggtggattcgctgtt
gggagattctccggtggaagaagtgccggggagagtcattttccggttgtgtatactgag
atggatggtgggctcaatgctgcacaaggatcggctccgaggagaatatctagaacggtt
agagctcatagggttagggaaagtcatggaattggaagagtttttcggaattttttctca
ttctttgggagaattggttctaggtcaaatttaaattcgaattctggaacagggaatgtt
gcttctgtgagtagaagccgtagcttagtgaattcaatgttcagtagaaactcgcggcga
cgtaggagagctttggaattggaagattga
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