Medicago truncatula (barrel medic): 11414692
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Entry
11414692 CDS
T01716
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11414692
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11414692
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11414692
04121 Ubiquitin system [BR:
mtr04121
]
11414692
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11414692
Peptidases and inhibitors [BR:
mtr01002
]
Metallo peptidases
Family M67
11414692
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Others
Others
11414692
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
11414692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
11414692
NCBI-ProteinID:
XP_003609726
UniProt:
G7JMQ8
LinkDB
All DBs
Position
4:complement(58331719..58340552)
Genome browser
AA seq
509 aa
AA seq
DB search
MTIDLDSMAPKVDVDNRLPLRYYYRIADSLLKQARVYREENNVVDLYIMLLRFISLVSET
IPYHRDYQATLANERAAYKKRSRLVLDELESLKPEFKRRLDKLNESRIQAPLPEENGFDM
ALQSSANSSLEWPAVNKRYNSSMDFKQSTGLGSQSSWKPNNTLSYNSMPIDKQFQKLSLN
VPLPNKETLSRHSFLGPNGLRGQWLGPSAEIKVQYPSSNDLTHAKDSSTVKYDLAGIKDG
DQGPLTSTMDSILSLDDGRWLHPTAESCSPVVTEPREDFLQSLNIKQPLPPPVLAQVHPE
RACIPHSKVADPRPGPAKSSHDSGHGPTTFQHLHIPVKMMEDFLRLASVNTRKNLETCGV
LAGSLKNRVFQITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFSLGWIHTHPSQTCFM
SSVDLHTHYSYQIMLPEAIAIVMAPTDTESPHGIFHLSDPGGVSVIRNCQERGFHPHEEP
SDGSPIYEHCSHVYMNANMKFDVLDLRER
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgacttggattcgatggctcccaaagtcgacgttgataatcgccttcctctc
cgctattactatcgaatcgccgatagtctcctcaaacaggcacgtgtctaccgggaggag
aataatgtagtcgatttgtacatcatgctccttagatttataagtttggtttccgagacg
ataccttatcatcgagactaccaagctacacttgctaacgaacgagcagcatataagaag
agatcacgacttgtattggatgagcttgagtccttgaagccagaattcaaacgccggttg
gacaaattgaatgaatcgcgtatacaagctccattgcctgaagaaaatggtttcgatatg
gctttgcagagttcagcgaattcaagtttggaatggccagctgtcaataaaagatataac
tcaagcatggatttcaaacagtctactggattgggctcacaatcttcatggaaacccaat
aatacgttatcttataattccatgcctattgacaagcagtttcagaaattatctctgaat
gtacccctaccaaataaggagaccttgtcaagacactcatttttaggaccaaatggtctt
cggggacaatggcttggacctagtgcagaaataaaggttcaatatccaagcagtaatgat
cttacacatgccaaagattcaagcactgtaaagtatgaccttgctggcattaaagatggt
gaccaaggaccacttacatccacaatggattcaattctctccttggatgatggaagatgg
ttgcatcctactgctgagtcttgttctcctgttgtaacggaaccaagggaggacttctta
cagtcgctcaacatcaagcaacctttgcctcctcctgttcttgcacaggttcacccggaa
cgtgcctgtattcctcattccaaagttgcagatccaaggccaggaccagcaaaatcttct
catgattctggacatggtcccactacatttcaacacctacacatccctgtaaaaatgatg
gaagattttctgagattagcttcagtaaacacgcgaaagaatttagagacttgtggtgtt
cttgcagggtctctgaaaaacagggttttccagataacaacactcataatcccaaagcag
gaatcaacttcggactcgtgtcaaacgttgaatgaagaagaaatatttgaagttcaagac
agcttgtcacttttttctttaggttggatacatacacacccgtctcagacttgtttcatg
tcatccgtggatctacacacgcattactcatatcagataatgttaccagaggcaattgca
atagtcatggctcctacagatacagagagtccacatggcatatttcacctgtctgatcca
ggcggtgtctctgtaattcgtaactgtcaagaacgtggatttcatccccatgaagagcct
tcagatggaagtccaatatatgagcactgctctcatgtctatatgaatgctaacatgaag
tttgatgttcttgaccttcgcgagagatga
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