Medicago truncatula (barrel medic): 11414779
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Entry
11414779 CDS
T01716
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11414779
03015 mRNA surveillance pathway
11414779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11414779
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11414779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF5388
DUF4604
Motif
Other DBs
NCBI-GeneID:
11414779
NCBI-ProteinID:
XP_003601886
UniProt:
G7J344
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All DBs
Position
3:42620332..42626945
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AA seq
619 aa
AA seq
DB search
MGAMKLGRVDDDDIAAADPDWSFDALVSELNALENNLSANSSTPPLHFHQTTSSRVNLSG
RKEIEKGRRFVFRAPEYETDSEDDDDKALVVSDTGKHFTCDEIYLSDSDDSDVESALEVQ
PYLMNKVGEVEGALIELTHDHQLRVNDGIRNKISALEIALLNESQNSISSLLRVEKFKDT
RQELDKKFDTQYQRQIAEALDNQLTAVQQDRELRSQIEERKIRSDAAYEEAKRKVALQEE
KQQQEKAKAEAEAKLKAEEVKQAALEAEKKAVMEAKTKAAMEAEKRAAAEKNAVENSKTV
TSGVTQETASSLLNTETKESSYVYRAAASASNIEHGRLQKLKELYERNQVVRSSSTQDYT
RHESDISRNIRQIRGIRDNVRSKASELVKLLNDHQCPQSFSVEMLVKKVVLSCASPASAP
FAIASVIVLITSQVPYVMDILLAELHTACLYTVPKHLVYKKSIFQSKEAYFRSIGYREDN
GKLESTEDYLKRLESYMKVYGALVQTEIPNIQNLHGLQEGWAWLARLLNSLPANQYTAVS
LNAFLQMAGFALFKRYKSQFLKMLNVISDKFLVDLKSQNIPESAKTTAYMQAYIEDKKFL
QVPEGRNLQSNTLSSEYEP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgggagctatgaaattgggtcgagtggatgatgatgacattgctgctgctgatcctgat
tggagtttcgatgctctcgtctccgagctcaatgccttggagaataatctctccgccaat
tcttccaccccacctttgcattttcatcaaacaacttcatcaagggttaacttatccggt
aggaaagaaattgagaaaggtagaaggtttgtgtttcgtgcccctgagtatgagacggac
agtgaggatgacgacgacaaagcgttagtagtatcggacactggaaaacacttcacttgt
gatgaaatttatctgagcgacagtgatgattctgatgttgaatctgctttggaagtgcaa
ccttacttgatgaataaagttggggaggtagaaggtgctttgatcgagttaacacacgat
catcaactgagggttaatgatggaattagaaataagatctcagcattggagatagctcta
ctgaatgaaagtcagaactctatttcatcccttcttcgagttgagaaattcaaagacaca
aggcaggagttggataaaaagtttgatactcaatatcagcgccaaattgcagaagcactt
gataatcagttgacagctgttcaacaagaccgtgaactcagatcacaaatagaagaaagg
aaaataagaagtgatgcagcgtatgaagaggccaagagaaaggttgctttgcaggaggaa
aaacaacagcaagaaaaggctaaagctgaagcagaggccaaacttaaagccgaggaagta
aaacaagctgcattggaagctgagaaaaaagcagtgatggaagccaaaacaaaggcagca
atggaagctgaaaaaagagcagcagcagaaaagaatgctgtagaaaattccaaaactgtt
acttctggtgtgacacaagaaaccgcatcaagcctattaaatactgaaaccaaggaatcc
agttatgtatatcgagctgcggcaagtgcttcaaatatagagcatggtaggctacagaaa
ctgaaagagctgtatgaaagaaaccaagtcgtaagatcaagttctacacaggattatacc
cgccacgagagtgatatttcccggaatataaggcaaataaggggcataagagacaatgtt
agatcaaaagcaagtgaactagttaaacttctgaatgaccatcaatgccctcaatcattc
agtgttgagatgttagttaaaaaggttgttttgtcctgtgcaagccctgctagtgctccc
tttgcaattgcctctgtcattgttctcattacatctcaggtcccatatgtaatggatatt
ttgctggctgagcttcacactgcctgcctttacaccgtcccaaagcacctggtttacaaa
aagtctatctttcaatcaaaagaggcctacttcagaagtattggttatcgagaagacaat
ggaaagttggagagtacagaagattatttaaagcggctagaatcatatatgaaggtgtac
ggtgcactggttcagactgaaattccgaacattcaaaatttgcatggcttgcaagaaggt
tgggcgtggcttgcaaggctcttgaattctcttccagcaaatcaatatacagctgtttca
ctcaatgcatttttgcaaatggctggatttgctctatttaaaagatataaatcccagttc
ttaaagatgttgaacgtcatctcagacaagtttttagttgatctgaaatcacaaaatata
ccagaatcagcgaagactactgcgtatatgcaggcttatatagaagataaaaagttcctt
caagtgccagaaggaaggaacctgcagtcaaatacgttatcaagcgagtatgagccataa
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