KEGG   Medicago truncatula (barrel medic): 11414779
Entry
11414779          CDS       T01716                                 
Name
(RefSeq) protein GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03013  Nucleocytoplasmic transport
mtr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    11414779
   03015 mRNA surveillance pathway
    11414779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11414779
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     11414779
SSDB
Motif
Pfam: GLE1 DUF5388 DUF4604
Other DBs
NCBI-GeneID: 11414779
NCBI-ProteinID: XP_003601886
UniProt: G7J344
LinkDB
Position
3:42620332..42626945
AA seq 619 aa
MGAMKLGRVDDDDIAAADPDWSFDALVSELNALENNLSANSSTPPLHFHQTTSSRVNLSG
RKEIEKGRRFVFRAPEYETDSEDDDDKALVVSDTGKHFTCDEIYLSDSDDSDVESALEVQ
PYLMNKVGEVEGALIELTHDHQLRVNDGIRNKISALEIALLNESQNSISSLLRVEKFKDT
RQELDKKFDTQYQRQIAEALDNQLTAVQQDRELRSQIEERKIRSDAAYEEAKRKVALQEE
KQQQEKAKAEAEAKLKAEEVKQAALEAEKKAVMEAKTKAAMEAEKRAAAEKNAVENSKTV
TSGVTQETASSLLNTETKESSYVYRAAASASNIEHGRLQKLKELYERNQVVRSSSTQDYT
RHESDISRNIRQIRGIRDNVRSKASELVKLLNDHQCPQSFSVEMLVKKVVLSCASPASAP
FAIASVIVLITSQVPYVMDILLAELHTACLYTVPKHLVYKKSIFQSKEAYFRSIGYREDN
GKLESTEDYLKRLESYMKVYGALVQTEIPNIQNLHGLQEGWAWLARLLNSLPANQYTAVS
LNAFLQMAGFALFKRYKSQFLKMLNVISDKFLVDLKSQNIPESAKTTAYMQAYIEDKKFL
QVPEGRNLQSNTLSSEYEP
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgggagctatgaaattgggtcgagtggatgatgatgacattgctgctgctgatcctgat
tggagtttcgatgctctcgtctccgagctcaatgccttggagaataatctctccgccaat
tcttccaccccacctttgcattttcatcaaacaacttcatcaagggttaacttatccggt
aggaaagaaattgagaaaggtagaaggtttgtgtttcgtgcccctgagtatgagacggac
agtgaggatgacgacgacaaagcgttagtagtatcggacactggaaaacacttcacttgt
gatgaaatttatctgagcgacagtgatgattctgatgttgaatctgctttggaagtgcaa
ccttacttgatgaataaagttggggaggtagaaggtgctttgatcgagttaacacacgat
catcaactgagggttaatgatggaattagaaataagatctcagcattggagatagctcta
ctgaatgaaagtcagaactctatttcatcccttcttcgagttgagaaattcaaagacaca
aggcaggagttggataaaaagtttgatactcaatatcagcgccaaattgcagaagcactt
gataatcagttgacagctgttcaacaagaccgtgaactcagatcacaaatagaagaaagg
aaaataagaagtgatgcagcgtatgaagaggccaagagaaaggttgctttgcaggaggaa
aaacaacagcaagaaaaggctaaagctgaagcagaggccaaacttaaagccgaggaagta
aaacaagctgcattggaagctgagaaaaaagcagtgatggaagccaaaacaaaggcagca
atggaagctgaaaaaagagcagcagcagaaaagaatgctgtagaaaattccaaaactgtt
acttctggtgtgacacaagaaaccgcatcaagcctattaaatactgaaaccaaggaatcc
agttatgtatatcgagctgcggcaagtgcttcaaatatagagcatggtaggctacagaaa
ctgaaagagctgtatgaaagaaaccaagtcgtaagatcaagttctacacaggattatacc
cgccacgagagtgatatttcccggaatataaggcaaataaggggcataagagacaatgtt
agatcaaaagcaagtgaactagttaaacttctgaatgaccatcaatgccctcaatcattc
agtgttgagatgttagttaaaaaggttgttttgtcctgtgcaagccctgctagtgctccc
tttgcaattgcctctgtcattgttctcattacatctcaggtcccatatgtaatggatatt
ttgctggctgagcttcacactgcctgcctttacaccgtcccaaagcacctggtttacaaa
aagtctatctttcaatcaaaagaggcctacttcagaagtattggttatcgagaagacaat
ggaaagttggagagtacagaagattatttaaagcggctagaatcatatatgaaggtgtac
ggtgcactggttcagactgaaattccgaacattcaaaatttgcatggcttgcaagaaggt
tgggcgtggcttgcaaggctcttgaattctcttccagcaaatcaatatacagctgtttca
ctcaatgcatttttgcaaatggctggatttgctctatttaaaagatataaatcccagttc
ttaaagatgttgaacgtcatctcagacaagtttttagttgatctgaaatcacaaaatata
ccagaatcagcgaagactactgcgtatatgcaggcttatatagaagataaaaagttcctt
caagtgccagaaggaaggaacctgcagtcaaatacgttatcaagcgagtatgagccataa

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