Medicago truncatula (barrel medic): 11414806
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Entry
11414806 CDS
T01716
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
mtr03410
Base excision repair
mtr03420
Nucleotide excision repair
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
11414806
03410 Base excision repair
11414806
03420 Nucleotide excision repair
11414806
03430 Mismatch repair
11414806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
11414806
03036 Chromosome and associated proteins [BR:
mtr03036
]
11414806
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11414806
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
11414806
DNA Replication Termination Factors
ELG1-RFC complex
11414806
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
11414806
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
11414806
Check point factors
HRAD17(Rad24)-RFC complex
11414806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_16
RuvB_N
ADK
Mg_chelatase
AAA_24
AAA_5
AAA_11
AAA_14
SLFN-g3_helicase
ResIII
AAA_2
AAA_assoc_2
nSTAND3
AAA_28
PhoH
AAA_19
AAA_30
AAA_25
AAA_7
NPHP3_N
RNA_helicase
AAA_18
ATPase_2
TIP49
Parvo_NS1
DUF815
Effector_1
NB-ARC
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
11414806
NCBI-ProteinID:
XP_024633679
LinkDB
All DBs
Position
3:complement(43605843..43610571)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS
SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV
PAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS
KKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPEGFA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatcattcagagcactcaaccatgggtcgagaaataccgtccaaagcaagtg
aaagacgtagctcaccaagaagaagtggttcgagtactcaccaacactctcgaaactgga
agctgcccacacatgctcttctatggtcctcccggcactggaaaaaccactactgccctc
gctatcgctcatcagcttttcggacctgaactctataaatctagggttttggaacttaat
gctagtgatgatcgtggtattaatgttgttcggactaagatcaaagatttcgctgctgtc
gctgtgggtaccaataagcctaagaatggttatccgtgtccaccgtataagatcattgtt
ctcgacgaggctgattcaatgacagaagatgctcagaatgcactgaggcgaacgatggaa
acttattctaaagttactaggttcttttttatatgcaactacattagcaggattatagaa
ccacttgcttcaaggtgtgcaaaattcaggttcaagccactgacagaagaaatcatgagc
agccgaatagtatacatctgcaaagaagaaggaatctaccttgatgctgagggtctttca
actttaagtaatatttctcaaggagatctccgtcgggctataacatacttgcagtctgct
gctcgcttatttggatcttccatttcttccaaggatctgatttctgtgtctgggattgtt
ccagcggaggttgttgaggcacttcttaaagcatgcagaagtggtaattttgatttagca
aacaaggaagtcaacaatttcattgcagaggggtatcctgtctctcagatgctaactcag
ttgtttgaggctattgttgaagaaaacgacatatcagatgagcagaaggcaaggatatcc
aagaagttgggtgaagcagataagtgcctagttgatggtgctgatgaatacttgcagctt
cttgatgtggtcagcaatacaatacaagctttatgtaacatgccagaaggatttgcttaa
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integrated database retrieval system