Medicago truncatula (barrel medic): 11414900
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Entry
11414900 CDS
T01716
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03430
Mismatch repair
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
11414900
03460 Fanconi anemia pathway
11414900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11414900
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
11414900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
T6PP_C
Motif
Other DBs
NCBI-GeneID:
11414900
NCBI-ProteinID:
XP_003591551
UniProt:
G7IF83
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Position
1:complement(43524857..43531592)
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AA seq
933 aa
AA seq
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MTIESQIIKPIAKGIVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEEWFQ
VIDNGCGISPNSFKVLGLKHHTSKLSEFHDLQSLTTFGFRGEALSSLCALGNLTIETRTV
NEPVATHLTFNHSGVLVAEKKIARQIGTTVTVKKLFSSLPVRSKEFKRNIRKEYGKLASL
LNAYALIAKGVRFGCTNTTGKNVKSVVLKTQGNDSLKDNIITVLGMNTFNCLEPMSLCIS
ESCKVDGFLSKPGLGNGRNLGDRQYFFVNGRPVDMPKIGKLVNELYRSANSKQYPIAIMN
FTVPTKAYDVNVTPDKRKIFFSEETSLLQALREGLQQIYSPDNASYAVNEFMRPAAKEDC
FELRSSQKKSPIVTKPASLNVAIPQEEHYTEFNTASISRDKNNSDRNGGSISLNEHKEKH
TTDSNNASESDDGDLFSHVEEGLIRESGGGLMGKEFTLRAHKTLKGDKSGRQMASTHIAL
RNQATLVSRTVESGGSSDKYSSDSSRHVQSTLNNFVAVSKRKRDDIITALSEVPVLRNQA
PQCKLKTVNTETNDLITRSYLHLDQINETSTPSEIENLQQRNPDGINHSSVNSLSFREDS
TDREPNMKPHQENKTHLADTASVTPSSNNLIDTTDDVLDSPKSSGQKIFSNMQFSFQDLK
SRREKRLSLVQSSKYRYGKANGKSHYTAATLELSQPDIEQQKERVLAAAATELERLFKKE
YFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTILNQQPLLRPIRLEL
SPEEEIVASIHMDIIRKNGFTLEEDLNAPPGCRYKLKSVPYSKNTMFGVEDVKDLISTLS
DGDGHGECSIIGSYRQDSSDSICPPRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAE
LKSPWNCPHGRPTMRHLVDLTKIHKRSELIMQE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaatcgcaaataatcaaaccaatcgcaaagggaatcgttcacagaatctgt
tccggtcaagtcatcctcgacctctcctccgccgttaaagaactcgtcgaaaatagctta
gacgccggcgccaccagcatcgaaatctctcttaaagacttcggtgaagaatggtttcaa
gtcatcgataacggttgcggcatttcaccaaacagtttcaaggttcttggacttaagcat
catacttcaaaactatctgagtttcatgatcttcagtctctgactacttttggatttaga
ggagaggcgttgagttctctttgtgctttggggaatttgactattgaaacgagaactgtg
aatgaaccggttgcgacgcatttgacatttaatcattctggtgttcttgtggcggaaaag
aaaattgcgcgacaaattggaacgactgtgacggttaagaagttgttctcgagtcttcct
gttcgaagcaaagagtttaagcggaatatacgtaaggaatatggaaagttggcttctctc
ttgaatgcatatgcccttatagcaaaaggtgttcgatttggctgcacgaacacgactggc
aaaaatgtaaaatctgtggtactgaaaacccaaggaaatgattctctaaaagataacatc
ataacagtgcttggcatgaacactttcaactgcttggagcccatgtcattatgtatatct
gagagctgcaaagttgacggttttctttccaagcctggactgggtaacggaaggaatttg
ggagatagacagtatttttttgtaaacggtagaccagtggatatgccaaaaatcggaaaa
cttgtgaatgagttatatagaagtgcaaactctaaacaatatcccattgcaatcatgaat
tttacagttccaacgaaagcatatgatgtcaatgtgactcctgataagaggaaaatattt
ttttctgaagaaacttccttattgcaagcccttagagagggcttacaacaaatttattct
cctgataatgcctcttatgctgtcaatgaatttatgcggcctgccgcaaaagaagactgt
tttgagttgcgttcctctcagaagaagtctcctatcgtaacgaaaccagcgtccctgaat
gtggcgattcctcaggaagagcattatactgagttcaatactgctagtatttctcgggat
aagaataattctgaccgcaacggtggtagtatatctcttaatgagcataaggagaaacac
actactgattctaataatgcttctgaatctgatgatggtgatctattctcacatgttgaa
gaagggttgattcgtgagagtggtgggggtttaatgggcaaggagttcacactcagagcg
cacaaaactttaaagggtgacaagagtggaagacagatggcatctactcatattgctttg
cgcaatcaagctaccctggtctcaaggacagttgagagtgggggctcttctgataaatat
tcatctgattcatcaagacatgttcagtcaacccttaacaattttgttgctgtaagtaaa
agaaaacgtgatgacatcattacagccttatctgaagtgcctgtccttagaaatcaagct
ccgcaatgtaaattgaagactgtaaatactgaaaccaatgacctgataacaagatcatat
cttcatttggaccaaattaatgaaacttctacgccaagtgagattgaaaatttgcagcaa
cgtaatcctgatggcatcaaccacagcagtgtaaattcactgtcttttagagaagactct
actgacagagaacctaacatgaaaccacatcaagagaataaaacacatctagctgataca
gcatcagttacaccatctagcaacaatctgatagatactacagatgatgttttagattct
cccaagtcctctggtcagaagatattctccaacatgcaattttcttttcaagaccttaag
agtaggagagagaagagactttctttggtacaatccagcaaatacagatatggaaaagct
aatggcaaaagtcactatacggctgcaactctggagctttcacagccagacattgaacag
cagaaagaaagggttttggcagcagcagccaccgaactcgaaagattgttcaagaaggaa
tacttcagcagaatgaaggtgattgggcaattcaatcttggatttatcattggtaaattg
gatcaagatttattcattgtggatcagcatgctgctgacgagaaatacaattttgagtgt
ctgtcccaatcaaccatattgaaccaacaacctctgcttaggccaataagattggagtta
tcccctgaggaagaaatagttgcttcgattcacatggacataatcaggaagaatggattt
actttggaagaggatctaaatgcaccacctggatgccgttataaattaaagtctgtcccc
tacagtaaaaacaccatgtttggagtcgaagatgttaaggacctgatttcaactctatct
gatggtgatggtcatggagaatgttccattattggtagttatagacaggattcctcagat
tcaatctgccctccaagagttcgtgcaatgttggcatctcgagcatgtcgatcatcaatt
atgattggtgatgcacttggaagaaatgaaatgcagaagatacttgagcatttagcggag
ctgaaatccccgtggaattgtcctcatggcaggccgaccatgcggcatttagttgacttg
acgaaaattcataagaggtcagaattaataatgcaggagtaa
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