Medicago truncatula (barrel medic): 11415051
Help
Entry
11415051 CDS
T01716
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11415051
04121 Ubiquitin system [BR:
mtr04121
]
11415051
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
11415051
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
11415051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RNA_bind
NCBP3
Motif
Other DBs
NCBI-GeneID:
11415051
NCBI-ProteinID:
XP_003619874
UniProt:
G7KQB2
LinkDB
All DBs
Position
6:33793048..33798228
Genome browser
AA seq
1173 aa
AA seq
DB search
MSLQQRRERREGSRFPSHRPPRQEWIPKGAGASSSASTTSTTTTASTTTAAAATTTVDQP
TSLHSHEKNTNSDGGSSNQGAVVAPTFARHRSNHHVAHRVEREHVAHRTDRDHVAHRVER
ERVAHRVEREHVAHRMEREHVAHRVEREHVAHRVEREHVAHRVERGRGRSGNMAGRQYGS
RDSSLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTS
VDLSAEKNLGFNWRCPGCQSVQHTSSKDIKYACFCGKRVDPPSDLYLTPHSCGEPCGKPL
EKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTC
GQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASCFCSKMTQVLFCGEMAMKGEFEAEGG
VFSCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKACCCGKTKLEDERKSCVDPIP
TCSKVCSKTLRCGVHACKETCHVGECPPCKVLISQKCRCGSTSRTVECYKTTENQKFTCQ
KPCGAKKNCGRHRCSEKCCPLSGPNNGLTTPDWDPHFCSMLCGKKLRCGQHVCETLCHSG
HCPPCLETIFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPP
CSVPVSKECVGGHVILRNIPCGSNNIKCNNPCGRTRQCGLHACGRSCHSPPCDILPGIVK
GLRAACGQTCGAPRSGCRHMCMALCHPGCPCPDARCEFPVTITCSCGRISANVPCDVGGN
NSNYNADAIFEASIIQKLPMPLQPVDANGQKVPLGQRKLMCDEECAKLERKRVLADAFDI
TPSLDALHFGENSSYELLSDTFRRDPKWVLAIEERCKILVLGKSKGTTHGLKVHVFCPMI
KDKRDAVRMIAERWKLAVNAAGWEPKRFIVISATQKSKAPARVLGVKGTTTLNAPLPTAF
DPLVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDRNALAVFHDPARAATAMRR
LDHGTVYQGAVSFVQNAGASAASSVTSAWGGTKEGALRSNPWKKAAVLDPGWKEDSWGDE
QWTTAGDSANIQPSALKKEAPIPASLNPWNVLNHESSSSSSPATVIRSVASGKQTESGNV
STKVEPSAGGADGGNSDATEAAEVVDDWEKAFE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcaacaaagacgagaaaggagggaagggtcgaggttcccttcacaccgtcct
cctcgccaagaatggattccgaaaggagctggagcatccagctccgcctccaccacatcc
accaccaccaccgcctccaccaccactgccgccgccgccaccacaactgttgaccaacct
acaagtttgcactctcatgagaagaacactaatagtgatggtggttcatccaatcaaggg
gctgttgttgctccaacatttgctaggcatagaagtaatcaccatgttgctcatagggtg
gaaagggaacatgttgctcataggacggacagggatcatgttgctcacagggtggaaagg
gaacgtgttgcgcacagggtggagagagaacatgttgcccatcgcatggaaagggaacat
gttgctcacagggtggagagggaacatgttgctcatcgtgtggagagggaacatgttgct
catagggtggaaaggggtagagggaggagtgggaatatggcggggaggcaatatggatca
agggactctagcttgcctcaattagtgcaggagattcaggagaagctcacgaaaggtacc
gtggagtgcatgatttgttatgatatggttcgtaggtccgcgcctatctggtcttgctcc
agttgctactctatctttcacctgaattgcatcaagaagtgggctcgtgcgcccacctca
gttgatttatcggcggagaagaatctagggtttaactggcggtgtcctggttgccagtct
gtgcaacatacgtcttcaaaggatattaagtatgcttgcttttgtgggaagagggttgat
cctccgtctgatttgtatttgacccctcattcatgcggcgaaccgtgcgggaagcctctt
gaaaaggaggtgtttgttactgaagagagaaaggacgagctttgccctcatgcttgtgtc
ttgcaatgccatccgggtccgtgtcctccatgtaaagcatttgcccctcctcgtttgtgc
ccttgtgggaagaaaagaattgctactcgctgctctgatcggcagtcagatcttacctgc
ggtcagcgctgtgataagcttcttgattgtggacgtcatcactgtgaaaatgcatgccat
gtgggtccttgtgatccttgtcaggtgctaattgaggcctcttgcttttgcagtaaaatg
acacaggttcttttttgtggggagatggctatgaaaggtgaatttgaagcagaaggtgga
gttttttcttgtggttccaattgtggaaatgtgcttggctgcagtaatcatatctgccgc
gaggtttgtcatccgggaagctgcggtgaatgtgaatttttaccaagtcgggttaaggca
tgctgctgcgggaaaacaaagttggaggatgaacgcaagagttgtgtggatccgatacct
acctgctcaaaagtatgcagcaagacccttcgttgtggggtacatgcttgtaaggagaca
tgccatgtcggggaatgtccaccgtgtaaggtcctaatttcacagaaatgtcgttgtggc
tcaacttccagaactgtggaatgctataaaacaacagagaatcagaaatttacttgtcaa
aagccgtgtggggcaaagaagaattgtggaaggcaccggtgtagtgaaaagtgttgtcca
ttgtctggtccaaataatggtttgactactccggattgggatcctcacttttgttccatg
ctgtgtgggaagaagctgagatgtggtcagcatgtgtgtgaaacgttgtgtcacagtggt
cattgcccaccttgtcttgaaacaatcttcactgatttagcatgtgcttgtggtatgact
tcaattcctcctcctctaccttgtggtacaatgcctcccttatgtcagcttccatgttcg
gttcctcagccgtgtggccattcaggctctcatagctgccattttggagattgccctcct
tgttcggtgcctgtgtcaaaagaatgtgtcggtggccatgtcattcttaggaacatacct
tgtggctcaaataatattaaatgcaataatccctgtggaaggactagacaatgcggttta
catgcatgtggtagatcatgtcactccccaccttgtgatattctacctggtattgtgaaa
ggtttacgagcggcatgtggacagacatgtggtgctccaaggagtggctgccggcacatg
tgtatggctctctgtcaccctggatgtccttgtcccgatgcaagatgtgaattccccgtt
acaattacttgttcttgtggccgcatatcagcgaatgttccttgcgatgttggtggtaat
aacagtaattataatgctgatgcgatttttgaagcttcgatcattcaaaaattgcccatg
ccacttcaaccagtcgatgcaaatggccaaaaagttcctcttggacaaagaaagctgatg
tgtgacgaagaatgtgctaagttggagcgtaaaagggttcttgctgatgcctttgacatc
actccaagtcttgatgctctccatttcggtgagaattcttcttatgagttgctttctgac
acgtttagacgtgatccaaagtgggttttggctattgaggagagatgcaaaatattagta
cttgggaaaagcaaaggaactacacatggtttgaaagtccatgtcttttgtcctatgata
aaggataaaagagatgcagtgagaatgattgctgaaagatggaagcttgcagtaaacgct
gctggttgggagccaaagagattcatcgtaatttctgccactcaaaaatcgaaggccccg
gctcgtgtgcttggtgttaagggtaccacaactctaaatgcgccacttcctactgcattt
gatcccttggttgacatggacccacggcttgttgtctcgtttccagacttgccaagggac
gccgatattagtgccttggttttgagattcggcggtgaatgtgagcttgtttggttgaat
gacaggaatgctttggccgtctttcacgatcctgcccgagctgcaactgcgatgaggagg
ttggatcacggaacagtttatcagggtgctgtttcgtttgtccagaatgctggagcatct
gcagcgtcttcggttaccagtgcctggggaggaacaaaagagggagcactgagaagcaat
ccatggaaaaaggcagcggttctcgacccgggttggaaagaagattcttggggcgatgaa
caatggactactgccggtgattctgcgaatatccaaccatcggctctgaagaaagaagcg
ccaatacctgcttcattgaatccttggaatgttttgaatcatgaatcgagttcgagttca
tcaccagcaactgtcattagaagtgtagcttctggaaaacaaactgaaagcggcaatgtc
tcaactaaggtggagccttctgcaggtggcgcagatggaggaaactcggatgcaacagaa
gctgctgaagttgtagatgattgggagaaggcttttgaatga
DBGET
integrated database retrieval system
