Medicago truncatula (barrel medic): 11415523
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Entry
11415523 CDS
T01716
Name
(RefSeq) transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11415523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11415523
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
11415523
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
11415523
NCBI-ProteinID:
XP_003611714
UniProt:
G7K6L5
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All DBs
Position
5:6183463..6186706
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AA seq
344 aa
AA seq
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MEHNNNNNNMSSSQDEISLFLHQILLRSSSSSSMPGSINQLQDGKISALDSTSRSNHAIN
VTSSSVGAGGGLSGNDTDEYDCESEEGVEALIEEVPTKSVGASRSSSKRSRAAEVHNLSE
KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGLSLHPMYF
HEGLHSLPLSRMSTELSEGNGSNPLNMTSTLPHPQDNPLLYPSNLPNKNTLPSQPSMSSY
PSYINDTETSFGVESGIPAQKERLQRSSEPMHGEDLLQHQQLNAINSFTNLLGGSQVVKE
FQSGAMATSTTNNTLQTCVAGRDQSGVVMRNSEPNIIFTSQLSR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaacataacaacaacaacaacaacatgtcttcttcacaagacgaaatctctcttttt
cttcatcaaattcttctccgttcatcttcatcttcttccatgccaggatccattaaccag
cttcaagatggaaagatctcagcccttgattcaacttctagatcaaaccatgctataaat
gtcacttcctcttctgttggagcaggaggaggactcagtggtaatgacactgatgaatat
gactgtgaaagtgaggagggtgttgaagcattgattgaagaagttccaacaaagtcagtt
ggtgcttctaggagttcttcaaaaagaagtagagcagctgaagttcataatttgtcagaa
aagagaagaaggagtaggatcaatgagaaaatgaaagctttacaaaatctaattccaaat
tctaacaagactgataaagcttcaatgctagatgaagctattgaataccttaaacagctt
cagctccaagtacagatgctgtcattgagaaatggattgagtttgcatcctatgtacttt
catgaaggcttgcattctctgcctttgtctcggatgagtacggagttgagtgaaggaaac
ggttctaatcctttaaatatgacatctactctgcctcatccccaagacaaccccttgctc
tatccatcaaatctaccaaacaaaaacacattgccgagtcagccatcaatgtcttcctat
ccttcatatattaacgacacggaaacttctttcggggtggaatctggaatcccagcacag
aaagaacgtcttcaacgatcttcagagccaatgcacggcgaagacttgttgcagcaccag
caattgaatgcaataaattcttttaccaatctattaggtggttctcaagttgtcaaagaa
tttcagtcgggcgcaatggctacatctactactaacaatactttgcaaacttgtgtcgct
ggaagagatcagtcaggagtggtcatgagaaatagcgagcccaacattatatttacatcg
cagttaagtaggtaa
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