Medicago truncatula (barrel medic): 11415668
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Entry
11415668 CDS
T01716
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X2
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
11415668
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11415668
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
11415668
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
11415668
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
11415668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
UBA
Utp25_C
Motif
Other DBs
NCBI-GeneID:
11415668
NCBI-ProteinID:
XP_003591139
UniProt:
G7I8P0
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All DBs
Position
1:complement(40900011..40906967)
Genome browser
AA seq
876 aa
AA seq
DB search
MDSNNKSSDQVISEMVEMGFQHSQILEAIKVVGPSIPSVVEHIFNTSNSSSSNREPSTTH
VTKSISNNGKALKKRTFSSSLQVPKSRTINHYFQSSSKVNEKNKNVVVVDDDNDDEDVEE
HKEKEFLPRMGFDHDSAVAHAIDVASDWQQKASILLQKHFGFSSLKSFQKEALSAWIDHR
DCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPD
NTVEKKAMRGMYSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAY
SRLSVLRENFTTGKLKSLKFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPN
LRFMVKHSRTSWASYEKDFHELIKVYGGNKKAFTSGDADGVSISSDASDTDSVSSDDVDG
NQDDCDDRDINVMHSGNTSNHKKRRKLTIEFLENDVDVFQSADDLDVTCGEFCVQPPPKQ
CELSETIDTPTKPEKRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGL
PKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRD
GKLADCILYANLARKPSLLPSRRSEDMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGED
FSHQKCLLCDVCNNGPPQRLNLKEEACILLQTIMLAGNARSYSVDSSDNDDIHFNSKDRR
LGERPSLTTLVRSIREQFQKFLTTDILWWRGLTRILEAKGYIREGDDKTNVQIKYPDLTE
LGLEFVKSITEETFYVYPEADMLLETKTDKPFSSFSEWGKGWADPEIRRQRLERMQVDRS
PMKRQNPRKQRKRRVRKTKPDLRTSRGRLSAKLSKK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggattccaacaacaaatcttccgatcaagtcatttcagaaatggttgaaatgggtttc
cagcattcccaaattctcgaagcaataaaagtagtgggtccttcgattccaagcgttgtg
gagcatatcttcaatactagtaatagtagcagcagtaaccgtgaaccatccacaacccat
gtcacaaaatcaatttcaaataatgggaaagctctcaaaaaacgaactttttcatcttct
cttcaagttccaaagtccagaacaatcaaccattattttcaatctagtagtaaagtcaat
gagaaaaacaaaaatgttgttgtcgttgatgatgataatgatgatgaggatgtggaagag
cacaaggagaaagagttcttaccgcgaatgggatttgatcatgattccgcagtagctcat
gctatcgatgttgcatctgattggcagcaaaaagctagcattttgttgcaaaagcatttt
ggtttttcatctttgaaaagttttcagaaggaagctctctctgcttggattgatcataga
gattgtcttgtcttggctgcaactggatctgggaaatctctatgctttcagattcctgca
ttgttaactgggaaagtggtggttgtgatttcgcctttaataagcctaatgcacgatcaa
tgcttaaagctaacaaaacatggaatcagtgcttgctttcttggctctgggcagcctgat
aatactgttgaaaagaaagcaatgagaggcatgtatagtatagtgtatatttgtccagaa
acagttctaagattgattcaaccgttgcagaagcttgctgaaacccgtggtattgctttg
tttgcaattgatgaggtacattgtgtttctaaatggggtcatgatttccgtccagcttac
agccgactgtctgtattgagggaaaatttcactactggcaagctaaaatccttgaaattt
gatatacccatgatggcgttgacagctacagctacaaagagagttcgagaagacatttta
aaatcactgcgtttgtcaaaagatacaagtgttgttctcacatcattttttcgacctaat
ttacgcttcatggtaaagcatagtagaacatcatgggcttcttacgagaaagattttcat
gaattgattaaagtatatggtgggaataagaaagctttcacctcaggtgatgcagatggt
gtttccattagctctgatgcttctgatacagacagtgtttcttctgatgatgtggacggc
aaccaagatgactgtgatgatagggatattaatgtaatgcactctggaaacaccagcaat
cataaaaaaagaagaaaactgacaattgagttcctggaaaatgatgttgacgtctttcaa
agtgcggatgacttggatgttacatgtggtgaattttgtgtgcaacctcctcccaagcaa
tgtgagttatctgagacaattgatacacctacgaaaccagaaaaaagactcaaaatgctt
aaggagcctttgggacaaggaccaacaattatatatgtacccaccagaaaagatacagtg
agaattgccaagtatctctgcaagtctggtgtgaaggctgccgcttataatgcagggctg
cccaagttgcatctaagaaggactcataaagagtttcatgaaaatactttagaggttgtt
gttgcaacaatagcgtttggaatgggaattgataaatcgaatgttagaagaatcatccac
tatggttggccgcagagtttggaagcctactaccaagaagctggacgggctggtcgagat
gggaaattagcagattgcattctatatgcaaacctagcaaggaagccatcacttttgcca
agtcgtagaagtgaagatatgacaaaacaagcatatatcatgttgtctgattgtttcaga
tatggaatgaatacttcatgttgtcgagcaaagatacttgtagaatacttcggagaggat
ttcagccatcagaagtgtctcttatgtgatgtttgcaataatggaccacctcaaagactg
aatctaaaagaggaggcttgtattttactgcaaactataatgctggccggaaatgcacgt
agctattccgtggattcctcggataatgatgatatccatttcaattccaaggatagaaga
ctaggagagaggccaagtctaacgacgttagttagaagtataagggagcagtttcaaaaa
ttcttaaccactgatatactgtggtggagaggccttactcgaattttggaagctaaagga
tatatcagggaaggagatgacaagacaaatgttcagataaaatacccggacttaacagaa
ctaggtttggaatttgtgaagtccataactgaagaaactttttatgtttaccctgaggca
gatatgttacttgagacaaaaactgacaaaccgttttcctcattctcagaatggggaaaa
ggttgggctgatcctgagatccgtcgtcagcgtctagaaagaatgcaagttgatagaagt
ccaatgaagcggcagaaccccagaaagcaaagaaagaggagagttagaaaaacaaaacct
gatttgaggacttctcggggtagattatcagcaaaactctcaaaaaagtaa
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