Medicago truncatula (barrel medic): 11415723
Help
Entry
11415723 CDS
T01716
Name
(RefSeq) putative disease resistance protein RGA3
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
NB-ARC
LRR_RPS2
LRR_8
LRR_4
WH_DRP
LRR_13
LRR_1
LRR_Zer-1
AAA
Rx_N
AAA_16
DUF815
nSTAND3
AAA_22
AAA_33
LRR_6
Motif
Other DBs
NCBI-GeneID:
11415723
NCBI-ProteinID:
XP_003612736
UniProt:
G7KAW6
LinkDB
All DBs
Position
5:11906367..11909639
Genome browser
AA seq
1090 aa
AA seq
DB search
MDVAMLSHSISNILQSTSSLKPLPSRLSGLDITQLENILTQINDKVHKHSHYSEWLQKVK
DVVIDLNDLMEDLRYKESITDSSKSLIKTGLNIINRYQFKKAIVQVNKATEELELLLKEE
KTVISNTNEKRKLAYKDFEKSTEHVAVGREREKKEIIDKLLKMNKVDTAVPFVIAIVGVP
GIGKTKLARLVCEDEQVKGSSGFQAIWINGLHHQFDVESIVKSVTDRYVHKKRVLLVIDD
LRIEIENGDLEKLQKKLAQAAGGRTDTVILVTTTRSSHVANKIAARHVLKLQGLNQEESW
SLFQQIHGPITSTKKVQSTTEPEREPEREIVEGCAGVPLLIVIVAMVMKKQSGGGGRGDN
WIPKALETLKFIYYDNLPTYQKLCFAYCSLFPEDYLIDAERLIQLWTAEGFLINPEQQFG
QACFKDFVPLVFHQAEEESDYLRYCGVVRNNMNNCLYRMNPLMHKLARQEIAGNENITVD
VMGERVQDGMLRVSFDFALDLSCEIPDLVFQKAKKLRTFLLPYNINNPRLPYEVKVTTST
CDKIFDTFKCSLRVLDLHDLGIKTVPSSIEDVKYLRYLDLSHNNIEKLPSCITNLIHLQT
LKLSQCHVLKELPKDMDDLSCLNHLDLEGCLDLTQMPSGINKLTSLQTLSLFVASKKQVT
GGLRSLTDLNNLRGHLEISHLEQVKFSPSKEAAKDDFLKNKQHLEFLTLRWDHDEEEESN
VDIDNKFIDCLEPHQNLKELLVVGYHGHMLSNWLASLQFLGKFTLNDCPNCKFLPPMDQL
PHLKVLQLRRLDSLKFIAENNHTNTPKFFPSLKELAISDCPNLKSWWEKDIRENDRPSFS
CISKLNIQYCPQLASMPLYPGLDDELVVVESSVISMKDTMKYAAPEIKTSNSQLKPFSKL
KSMVVERIDHSPPERWLKNFISLEELHIRDCFNLASLPQGFKSLSSLQTLTIERCQELDL
DKHPNEWEGLKNLRSLTLRSIPKLKSLPWGVENVNTLKDLRIYDCHGLTFLPESIGNLTS
LEKLVLSECRKLDSLPKGMEKLESLNTLIIMDCPLLLPRCQPDTGDDWPQIANIKNKLVK
ETSQDLMDHL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagccatgctttcccattccatctccaacatcctacaatctacaagctcccta
aaacccctaccaagtcgtttatcaggacttgacatcacccagcttgaaaacattctcaca
caaatcaatgacaaagtccataaacacagccactactccgagtggcttcaaaaggttaaa
gatgtagtcatcgatttgaacgatttgatggaggatcttcgttacaaggagagtatcacc
gactcatcaaaatcgcttatcaaaacaggcttaaacattataaatcgttaccaattcaag
aaagccattgtccaagtcaacaaagccactgaggaactcgaactgctgctgaaggaagaa
aaaacagttattagtaatactaatgagaaaagaaagttggcatacaaagattttgagaaa
agtactgagcatgtagctgttggcagagaaagagagaagaaggagattatagataaactg
ctgaagatgaacaaggttgatactgctgttccttttgtaattgctattgttggtgttcct
ggaattggcaaaacaaaacttgctcgtctcgtttgtgaagatgagcaagtcaaagggagt
tctggtttccaagcaatttggatcaatggtcttcatcaccaatttgatgttgaatccata
gtaaaaagcgttactgatcggtatgttcataagaaacgcgtcttacttgttatagatgat
ttgcgaattgagattgagaatggtgatctcgagaagttgcagaagaaattagcgcaggct
gcaggtggaaggactgataccgtcatacttgttacaacaacacgaagcagccatgttgcc
aacaaaattgctgctagacatgttttgaagttgcaggggcttaatcaagaggaatcttgg
tcattgtttcagcagattcatggaccaattacttcaaccaaaaaagtgcaaagcaccact
gaacccgaacgtgaacctgaacgggagattgtggaaggttgtgctggagttcctcttttg
attgtgatcgtagcgatggtaatgaagaagcaaagtggtggtggtggtcgtggtgacaac
tggattccgaaagcattagaaacgcttaagtttatctattacgacaaccttcccacttat
cagaagttatgcttcgcatattgttcattgtttccagaagattatttgattgatgcagag
agattgattcaactctggacggctgaagggtttcttatcaatccagaacaacaatttggt
caagcttgtttcaaagactttgttcctttggttttccatcaagcggaagaagaaagtgac
tacctccggtactgcggtgttgtgaggaacaatatgaacaactgcttgtatagaatgaat
ccgttgatgcataaactcgcaaggcaagaaatcgctggtaacgaaaacatcaccgtggat
gtgatgggggaaagggttcaagatggaatgctgcgagtttcgttcgattttgctttagat
ctttcatgtgagatccctgatttggtgtttcagaaagcaaagaaactaaggacctttctt
ttgccatacaacattaacaaccctcggcttccgtacgaggtaaaggtgacaacatcaact
tgtgataagatcttcgacaccttcaagtgctcgctacgcgtgttggatctacatgatttg
gggatcaagacggttccgagctctattgaggatgtgaagtacttgaggtatctagatctt
tcccataacaacatagagaagcttcctagttgcataacaaatcttatccacttgcaaaca
ttgaaactgtctcaatgtcatgtcctcaaggaattgccaaaagacatggacgatttgagt
tgcctcaatcatcttgacttagagggatgcttggatctaactcaaatgccaagtgggata
aataagcttacttctttgcaaacattgtcacttttcgtagccagcaagaaacaagtcacg
ggaggactaagatcactcacagatcttaacaatctgagaggccacttggaaatttctcat
cttgaacaagtcaagttctctccatcaaaggaagctgctaaagatgattttttgaaaaat
aagcaacacctcgagttcttgactctaagatgggatcatgacgaggaggaagaaagcaat
gtcgacattgataataaatttatcgattgtctcgagccacatcagaatctgaaagagcta
ttagttgtcgggtaccatggccacatgttgtctaattggctcgcttcacttcaattcctt
ggtaaatttaccttgaacgactgtcccaattgcaaatttctcccaccaatggatcagctt
ccacatctcaaggttctccaacttcggagattggactctttgaaattcattgcagagaac
aatcacactaatacaccaaaattctttccatccttgaaggaacttgcaatctcagattgt
cctaatctaaaaagttggtgggaaaaagacatacgggaaaatgatagaccatctttcagt
tgcatttcaaagctaaatatccaatattgtcctcagttagcttccatgccactatatccc
ggtcttgatgatgagctcgttgtggtggagtcgagcgtaatatcaatgaaggatacaatg
aagtacgctgctcctgaaatcaaaacttctaattcacaattgaaacccttctccaaattg
aagtccatggtagttgagcgcatcgaccattctccaccagaaagatggctcaaaaacttc
atttcacttgaggaacttcacattagagattgttttaatttagcgtctctaccacaaggt
ttcaagtctttgagttcactccaaacactcactattgaaagatgtcaagaacttgatctt
gacaaacatccaaatgagtgggagggtctgaaaaaccttcgttctcttacattaaggagt
attccaaaacttaagtcccttccatggggagttgaaaatgtgaacactttgaaagactta
aggatttatgattgtcatggtttaacttttttaccagaaagtataggtaacctcacttca
cttgaaaaactggttctttctgaatgcagaaagttagattctctgcccaaaggaatggaa
aagcttgagtctctaaatactttgattattatggattgccctttgttattgccaaggtgt
caaccagacacaggtgatgattggccacaaattgctaatataaaaaacaaactggtgaaa
gaaacttctcaagacttaatggatcacttgtga
DBGET
integrated database retrieval system
