Medicago truncatula (barrel medic): 11415726
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Entry
11415726 CDS
T01716
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11415726
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11415726
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11415726
NCBI-ProteinID:
XP_003613375
UniProt:
G7K488
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Position
5:complement(15511860..15513380)
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AA seq
350 aa
AA seq
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MIDRCWRPNPEWRKHRQQLATCSVGYAGKMTNNIGKGLTHYKVTDPNDDPIKPQPGTLRY
GASVIQGKVWITFKKDMNIKLIKPLLISSFTTIDGRGVNVHIADNACLMISKATDIIIHS
IRIHHCKAQTPGMVMGPNGKVIHLGQVDGDAIRLVTASKIWIDHNTLYDCEDGLLDVTRG
STNVTVSNNWFREQDKVMLLGHDDGYLRDINMKVTVVYNHFGPNCNQRMPRIRHGYAHVA
NNLYLGWMQYAIGGSMGPSLKSESNLFIAPKVGSKEVTWRKIDHTNEDKWEFHSVKDAFE
NGAAFAVTKGSRVPKPNYSKEQIFQVVDVKSIRSLTRSSGAFQCSKTSIC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcgatgttggagaccaaatcctgaatggagaaaacatagacaacaactagca
acttgctctgtaggctatgctggaaagatgacaaacaacattggtaagggtctcacccat
tataaagttactgaccctaatgatgatcctataaaacctcaacctggtacgttgagatat
ggagcttctgtaattcaaggtaaagtgtggatcacattcaaaaaagacatgaacattaaa
ctcataaagccccttctcatcagcagtttcacaaccattgatggtcgcggagtcaatgtg
cacattgctgataatgcatgcttaatgatatccaaggccaccgacataatcattcatagc
attcgaattcatcactgcaaagctcaaaccccagggatggtgatggggccaaatgggaag
gtaattcatttgggccaagtagatggagatgcaattagattagtcaccgcttcaaaaatt
tggattgatcataatacactttatgattgcgaagatggtcttcttgatgtcacacgaggt
tctactaatgtgactgtttcaaataattggtttagagaacaagataaagttatgcttctt
gggcatgatgatgggtatctgagggacataaacatgaaagttactgttgtgtacaatcat
tttggacctaactgcaaccaacgaatgccaaggattcgtcacggatatgcacatgtagcc
aacaatctttacttaggatggatgcaatatgccatcggcggaagcatggggcctagcctc
aaaagtgaatctaatctcttcatagcgcctaaagttgggagtaaagaggtaacatggaga
aaaattgatcatacaaatgaagacaaatgggaatttcattcggtaaaagatgcttttgaa
aacggagccgccttcgcagttacaaaaggaagtcgtgtgccaaagccaaattatagcaaa
gaacaaatatttcaagttgttgatgttaaatctataagatctttaacaagatcatcaggc
gcatttcaatgtagtaaaacctccatctgttga
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